XLOC_000032 (gene) - C. hemisphaerica

Overview
NameXLOC_000032
Unique NameXLOC_000032
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1447576..1454226+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000032 ID=XLOC_000032|Name=XLOC_000032|organism=Clytia hemisphaerica|type=gene|length=6651bp|location=Sequence derived from alignment at sc0000001:1447576..1454226+ (Clytia hemisphaerica)
GAACATTAGAAATGCAAGATAAGgaataaattacgtcacgagcaagTTTT ACCTCGTTAGTTTTCAAAAGATTGGGTGAAAAATATGGTGAACCTTTTCA ATCCTAGAGCTACGTACTTTTCTCAAAGGGACAGGTCAGCCTGAAACCAG TTATCTAGcctgtttttatcaaaattgagcTACAGAGCTTCAGAAAGCAT TCATTAGTTTGGTGTCATTGGATTAATATCAGTCGGTAAATGAGTACCAC TAAGCACTTCAGCATTACTGGATATTTCTTGTTGCTTAACCACAAGTGAA ATAAGACTTGCTGCTTCTCAGTTACAGAAACGGCTAATTGATTGATTGGC CTGAATGCGTTAGTTGTTTTAAATctgaaaatatcaatttttttaacatt tctcTTCGTATCTTTTAGATTTTTCAGAGCcagacccgggggggggcact caaggtaaatgacctaccagacgttcggcccttaagggtaggtttttcat agttcagctagtgcactgtaagggtaggaaattttgaNTCGTTCACAAAA CCATTCAAGTTTCCGATCAGGGATGCAGCCACGGTACGATCAGCACCATC ACAGCCAACAACGTCATCACCATCATCAACATCAGTTGCTAGATCGCAAG TCGTCCTCCGTCATGGACTTAAGATCGACTTCGGGTAAGAACAACATATT CTTTTCTTTCATAGCAATCTTATATATTACCATGCTCAAAACGAGCGAAC TATTTCGCATTGACTGGCACAAGCTCTCGGATTGGTGTATTAATTAATCA ATTAATTAATTGGTGTAtcaagtaattttttttctttgatataaAATCCC TCTCTGGAACATCTTTTAAATGAGTATTccgattctatcaaaagttaaat cCTATTTtattttgtctccgctgcagattataACGAGAGAAAGACTTTTC TTTAGTGGTATTTGTCAAGGAAAATAACTGTTTCTTTTAATGAATCAATA CTGTCATCTCTATGGACATATTGTTTCCAGATTATTGCCGTCCATCACCA GACAGTACCATGCTTTACAACAGCCGTGCATTGAAGAGACTTTCAATTAA ACCAGAACTAGATGAAGATGAGGGAAACATCAGTGATCATTCAACGACCT CCAGTGCTAGTTACTCAGGTATACTACTTCATATTTCTCTAGTCTTTCTT AGATTATGTTCAGACATTACGCTTCGAAACGAAACGGTTACGAAACATAG TAGATGGACACCAAAAACGGATCGAAACAGTAACGCTCCACTACACATTG AACTTTTGAGATTCTTAGAAAGTAAACACTTTCGGCCAGCTCAGCTCATT AAATTCTTTTACTTCTGTttacacatatttcatatcaggacagtgtcttt cCAATGTAAGCATTTTTTCTTCCTTCGGACCAATCTTGCTACACATCCGT GTCAACTCAATATCAAAaggcttgtaaattaaaattgatgaataagcaaa cgatatcacttttatctaaaaacaaaacctttaatttctttttttctctt ctagGAACCAGTTTATCAGGGAGTTTCTCAGGCTCACCACAAATGCAAAA AAGAATTATCCGTTCCGGTAACTTCAGTCAAAGAGGCGGAGGTGCACCAC CTATAAAACACGCCCAAAGCATGGATAACATCTTTTCCAGTCGCACTTAT GAGCATGAGTCACGTGGTAATGAATATCTTTTTGGATCCACAATGCAACG GAGGTCAGCTAAACGAATCCAGTCAACCAAGAGAGCTCAAATgatcaaaa tgaaaagttttgatGAACTTTTATCGTCTAAAAGTACTTCAAACTTAACT ACACTGAGCTCGTCAACAAGGCTCGGCCATTTGGGGTCAGGACCGAGAAG GGCATCTACCAAAACGAACACGCCCAGTGCTAACTTGATGACGATGAGaa ataatttgatgacgtcatcataccGTAATTTAGCGGACCGGAATGTGAGA GAAAACCCTGCATTTGCTGAACCAACAAAggtaatatttttaatttgtga aaaaaatatcataaaatgaTTCAAATAAATAGTTTAGTTTACTGCATATT TGTTACATTGCCAATGAATAATTAGCTGCTATTTGCGTATTTGCCtaagg ctgcacgcatcccctctgataagNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNtttcacctttcaaagtctctctaaggg ttacaaaaatcaggaaatttcaaagtagtctctctaagggtgggaaaaat cactatttttagaaaaaaaaattgattttgagagaaaaaaattacagaaa agtctcactaagggtaggaaatttttgaaaattagggaaaatttttcgaa aaagcctctctaagggtcactttttcactaaaatttggtctctctaaggg tcggttttcggaggtcccgtccgcacatacccctcattcaccaaccctag tacccccccCCCGGGATTTTTGAGTAATTTTCACCCATTTCaatgtgaca aaatttccaatttgccaaattttacgaaattgatctatcgccaaattaaa tccccgccaaaaattgtattttggccaatcgccaaattaagtcctcgcca aaatttatccacttaaggtaattcGAGCTAGTACTCATCTTCCATCATCT GAAACCCACATAGAATTGTTTTAATCCAAATCTCGAAATGATTATAATTT TCTCACATTTACTTATTCTTCCTACAAAGTACTGTAAAGTTAAAATTTAG agtagagtctacttctggctgaatttttgatgacgctgagtccagtgaag tagactaggagcatttgacgaggttgccatactaccgggccacttaatca cCCCATCcagtttataaaaaaagctttaagtggaccccgggctaaggTAC CTTCAGCTATAAAAAGGGTTAAATTATCTTTATTGTTTTTACAATTCTAG ACATTGCGAACGTCAAGTCCATATTTAGAACGTCGTTTAGCAGAAGCCAA AGAACGTCAATCGAAAAGGTCCGCCGCTCTCAAAAATCTTGATACAGATT TTGACAAAGCGAAAGCAATTATCAAGAAATACAAATCGAACGAAAATCTA TTGTCTATTTCAAACAAAGATAATGGATTGGTTAATGGTGATAGCCAATC AGAAGACAAGGATCATTACCACGTGATATGAAAGAGGATCGTTTGATTGG TTTATTGGAAGTTTAATGGTGATAGCCAATCAGAAGACAAGGATCGTTAC CACGTGATATGAAACAGGATCGTTTATTGGTTTATTGGAAGAGGGATACT TAACAGTTTCCGGTGGATTTCGCGCCGAAAGGGACAACCCTAAATGTGTA TTAGTTGCATGGAATTATAATAAATTATAGGCACTGATTATTCCAAAATC CAAAACAAAAGATAAGAAAAGCCTTATTGTTTGATTTGGTGCCCTATGCG AGAATGCATGAGGatttaaaataaattgattGATTGGCAAATTACGGGAA AAAACTTCAGCGTTGATAGACAAAGTTTGAGCAAAATTattcgaaaaaat gaaaatattgaagaacACGCAAGAAATATATAGCCAAGGCAGAACAGATG ATTTTAAGtgtaatatttttatatttgtaAGCTATCCGTATTATATTAAT GTTATGTTTTAATAACTTAACTAAGATAATTTTTTTCGTAAATTATATCA CCTTATACCAGAAGAATTTATGTAATTTAGTTCTAGTTCTGTCTAAAAAG ttgctacatgtttttttataagcattgtacttataagcatatctaggctc agatatggggaaaaattaagcatatggcaagcattacttgagcctacgaa aaatgttttttcctgattttggctttttttggctggaattttacggcTTT CAGTATTTCCTTAAATTTTTGCTTCGGATATAAGATCCCTCAAGCATTCT TTCAGCCTTATTAATCTTTCGACCTAAgtatctctgagcctgtttttgga ttcttatatgcttataaaaaaaaacatgtaatgggTTTCTGATGCATTAA TCTAGCTAAAACATATCTTCAccgaaaaatctttaaaatagaaTATTTCG CACATGTAGAAAAATAGCGAGTTTGTTAAAAGCTTTTGAAGAGAGAAGAA AAgctgaaacaatttgaaactaTTTGCAATGTTAGTCCGCAAAATCGACT GGTTTAAAATGGCAGGCAAAGTGATTGTCTACACCACTACGGTACAAAAA AACCATACATTAACTAACTTACGAAACACTAGGGCTTTTAGTTGGGAAAC AATAAGTTGTCCAAAACGAGAActgatacacccctgtgtcacagacccgg tggaccccccaccccagtggaaaaataggacaaaaaatcgtccccggtgg aaaaaatatcctacaatttcaaccccactgcgaaattgcactatgatttt atccccattgaaaactgaatgtaaaaaattgcactccaaaaccatcccca ctggaattttcgagctggaaacaatagattttctatccccattggtattt tgatagaaattttcatccccactgagggaaaaagttctaccggggcactg agacagagGGGTGTACTGATAATTGCTCAATTCGAAGCCTATTGAATACA CGACCACATCCTAACATCACTCAAACATACAATAACCCTTCCAGGTTTGC TATTAAACCTGACAATATTTCTGTTTCCCGGAAAGGAAAATACAAATTTT ATCTAGgctgtccacatagtacgtacgcactaaaatgtcgaaaattgagt accccctggtaagtacgtactttttcatttaaacccccccccctccttgg ttgaagaaaatttcgaattcaaatcgtttggtttggagctttatttcata catgaaactcaatgtttattaagaatttatttcttttccttgatgcgtat taAAAGTCGACAggaaaacaagcaaaaaagggctatgaaatttttttttc tgcgtacgtatattttcttttgacccctcccctccccgcttttgagaaga ccccccttcccccttagtgcgtaagtactatgtggacggcccctaatGCG AAAAAGACATCACCAATAGAAAAGTGTTAAAATAAGTTCATGATGTGTGT TCATATTTTTTTGTCTACTGTGTAAAAGACATTATACTAATACataaaag ttggaaaatattcatgatgatgATGCATGTTCATGTTTTTGAGCTTCTTG GCGTTCCATCAGACATAAATGATGTTCGTCTTGGTGTTTTTTCACGCATG CGTCATTCATGGCAAGTTTATCATCATTGGTAAATTCGTTCGAAAACCAA GGAATATCAGCGTAACACGTTTCGTTATTGTCATCTGCATGTTTGATGCA AGTCTCGTAAGTGATATAGTTGTTCGTACGCTTGGCGATGCTTCGCGATT CTGATATCGACAATAAACAAACCAACACGGCACATATTGTGAGAACTTGA TAGTATTTCATGTTGATCACTTTGGTGGATTTATATCTTGACGTTTTTCG TATGCTTGCTATAATGCAAAGAGAtgtcaaaagttgaattttcatttttt g
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000064TCONS_00000064Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000064-proteinTCONS_00000064-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1447576..1454226 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.02 0.04 0.06 1.35 1.17 2.49 2.8 1.43 1.86 1.8 1.68 11.72 9.81 2.7 4.44 7.5 13.06 5.44 6.13 7.9 8.24 3.03 4 7.1 5.8 4.02 2.74 16.85 15.89