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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000061 ID=TCONS_00000061|Name=TCONS_00000061|organism=Clytia hemisphaerica|type=transcript|length=981bp
CTTCGTTTGAGCTTCGTTTTAATTCGTttcatgaaacaatttgaaacgaa
aaaattgaaacaatatttggagaCGCTCCCTAATATTATGTATTTTTGAT
ATGGTACTCTATAGAAGGAAATGAAATTTATACTAATAATTTGTacataa
aaaaattactaaatacACCTGAAGTCCATTTGCTTTAAGTCAACCATAGA
TAATAAATGTCAGCAAAACTATTTCGTTGTACCTATCTCATGTTTTTTTT
CGTTGATCAGATCCATTCCTCGTTTCCAACGTTGTCGATTGACATTCGAA
TCCTTCGAGGTTTTATCGACTGTCGTGGAGGCTTTAGTGGTTGCGATGTA
TCTATTTCCTCGACTCGTATCATCTAAATCGATTGCATCGCTTAATTTTC
TCGTATAAGATGATGATATTTTTCTTCGTTGATTTTTCGGTGGCGGGCTT
GTTCCTCGGGATGAAGTTGTTGAAACTTTACGTGAATTTTCCTGGCGTGT
TCGGGAGGCGGGGGCGGTCACTTTAGAGGATTGCAATGTCTTTGGTTTAC
CAGTGTTGCTTGTTGGTAATTTCGGTTCAACaattttgattcttttgttA
GATCTATTTCCATCTCTCTTCTCATGTTTCGAACGTGATAAAAGTTTTCC
GAACTTACTAATGACAAATGAGAAACAACCATAGCTCTTAAAGCCATCCA
TCTTTAACATTACATAACTCTGAAATAAGCTATAAACTATTTACagatga
agctctttaattctACATCATACTATTCCATACGCTCCgttatttgataa
tatttaaAGTCACCGTTGaaaagaaactctcataaacgatgctttactat
tcgataggttcctatatttgatgaaaatcaaattcctcttgaaaatcgaa
taattGAGCATCAATTGTATTTGCAATTTTTAAGttacttttatgtcaaa
tatcgTGACTGATCACAATTTCCAAGTCAGG Run BLAST on NCBI transcript from alignment at sc0000001:1408673..1409653+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000061 ID=TCONS_00000061|Name=TCONS_00000061|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at sc0000001:1408673..1409653+ (Clytia hemisphaerica)
CTTCGTTTGAGCTTCGTTTTAATTCGTttcatgaaacaatttgaaacgaa
aaaattgaaacaatatttggagaCGCTCCCTAATATTATGTATTTTTGAT
ATGGTACTCTATAGAAGGAAATGAAATTTATACTAATAATTTGTacataa
aaaaattactaaatacACCTGAAGTCCATTTGCTTTAAGTCAACCATAGA
TAATAAATGTCAGCAAAACTATTTCGTTGTACCTATCTCATGTTTTTTTT
CGTTGATCAGATCCATTCCTCGTTTCCAACGTTGTCGATTGACATTCGAA
TCCTTCGAGGTTTTATCGACTGTCGTGGAGGCTTTAGTGGTTGCGATGTA
TCTATTTCCTCGACTCGTATCATCTAAATCGATTGCATCGCTTAATTTTC
TCGTATAAGATGATGATATTTTTCTTCGTTGATTTTTCGGTGGCGGGCTT
GTTCCTCGGGATGAAGTTGTTGAAACTTTACGTGAATTTTCCTGGCGTGT
TCGGGAGGCGGGGGCGGTCACTTTAGAGGATTGCAATGTCTTTGGTTTAC
CAGTGTTGCTTGTTGGTAATTTCGGTTCAACaattttgattcttttgttA
GATCTATTTCCATCTCTCTTCTCATGTTTCGAACGTGATAAAAGTTTTCC
GAACTTACTAATGACAAATGAGAAACAACCATAGCTCTTAAAGCCATCCA
TCTTTAACATTACATAACTCTGAAATAAGCTATAAACTATTTACagatga
agctctttaattctACATCATACTATTCCATACGCTCCgttatttgataa
tatttaaAGTCACCGTTGaaaagaaactctcataaacgatgctttactat
tcgataggttcctatatttgatgaaaatcaaattcctcttgaaaatcgaa
taattGAGCATCAATTGTATTTGCAATTTTTAAGttacttttatgtcaaa
tatcgTGACTGATCACAATTTCCAAGTCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000061-exon-sc0000001-1491911889:1408673..1409653 | TCONS_00000061-exon-sc0000001-1491911889:1408673..1409653 | Clytia hemisphaerica | exon |
| TCONS_00000061-exon-sc0000001-1510915933:1408673..1409653 | TCONS_00000061-exon-sc0000001-1510915933:1408673..1409653 | Clytia hemisphaerica | exon |
| TCONS_00000061-exon-sc0000001-1575043694:1408673..1409653 | TCONS_00000061-exon-sc0000001-1575043694:1408673..1409653 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1408673..1409653 + |
Blast
The following BLAST results are available for this feature:
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