TCONS_00000055 (transcript) - C. hemisphaerica

Overview
Name
Unique NameTCONS_00000055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000055 ID=TCONS_00000055|Name=|organism=Clytia hemisphaerica|type=transcript|length=2363bp
AGATGGCGTTTAAGTGCGCTAAACGCACTTAGGCGCAATTTTTTACATaa
gtgagtaccaagcttaaGGGAGCTCTTGATGTTTCTTTTTGTTATGTAcc
ctttttatttgtttttgaaattttattattcTAAACTTAACTTCTAAACT
TAGCGGGCTAAtcttttttcgttttctttactttactttactttacttta
AAAGCTACGAAGTGATGTAAAGGCTCTAGACGAACATTCATAATACATGA
AGTGTAGACATCTGGTACATGCTAAATATTATTTGACAATGATGCTGTAT
CTAACATTCAACCTACACGCTATCACGGTTTTACAGTTAATACTAACATT
TACTCACACGTTTGCATCAAACCAAACATATATGTGGCAATCGACAAACA
TCACCAGACAACAAACACATGTACAGTATATGCGATTCAAGAAATTAACT
CGTGGATATAAGGTATGGGCTACACTCGGTAGACATATCGATTGTAATTT
CAGTGGCTCCTCTAAAATGGAATGTGCTGATACTTGTATGAGAAAACCAA
TGTGTGTTACCTGGACATGGCGAGAACATTATGGGTTATGTCGCTGTTCT
GCCGAAGTATACCGTGTCTCTCCTACTTACATTTTACAGGATAACCAATT
TGATGCTTATGAAATTTGGAATCCCTGTATGCAGAATGCATTGTTATGTG
AACATGGAAGTATTTGCTCACCGAACCGCTTGACTAAAACATATCAATGT
CTCCATTGTTTCCCTCCATACACTGGCAAACATTGCAATGAAACTGgtCC
ATCGATACCCTCGACGATTTCGCAAGACATTTTACTTGGTAAAAACGCTT
CCTGTATTGCTTTGAAAGAACATTTCAATATACCAAACGGTTTGCAACAA
TACACAATACATCCATGGAGAGACCAACGAAAAATTCATATAAAATGTTC
AGgAAAAGTTATGAGATTTACCCGACTAGACACAAGAGACCAAGCTCCAG
TGAAGGAACTAAAAGCTGCGTCAATGGAAGATGGTCTTGTGCTTGAGAAT
AATTATCGTGCGCATGCGTCCTTTCTACGCATGGCTAAAATACTAATGAA
CTTTGAAACCATACGCATGAAATGTGTTCGAAACACAACAGAATTAGTTT
CACTGGGCAACAAAAGACAAGCTTCTGATGCCGATTTCAATGTTATACGA
TATTTCTCAGGAGAAAGTGATAGCCGACCTGTGGAGACGACAAGTATTTG
GAGATCCAGGCTGAATGGGGTGTGGGATGATTACCCAATTGATGCAGTCG
ACGACCTGTTATCTGCTGACAATGTTGAAAAAGAATATCGACCTTTCAAA
GATATTTATATAGGTAATGATGGTTTAAAAATGACATTCACAAATGAATC
ACAACAATGCTTTGGTCCTGAAGGCGATTTTAACCATTATTTACTCGAAG
TTTATTGATGAGAAATGGAAAcatatttctgacaaaaaaatGACCTTTCA
AAGATATTTATATAGGTAATGATGGTTTAAAAATGACAGTATNCGACAGA
ATAATGACCTTTCAAAGATATTTATATAGGTAATGATGatttaaaaatga
cattcaCCAATGAATCGCAACAATGTTTTGGTCCTGAAGGCGATTTTAAC
CATTATTTACTCGAAGTTTATTGATGAGAAATGGAAACATATTTCTGAAA
GAATATCGACCTTTCAAAGATATTTATATAGGTAATGATGGTTTAAAAAT
GACAGTATGATACTGGTCCGAACTTCCTATATCTGTAACCGAAAAATGAA
TCGATTTTAGACACCGAAGTTTTTGCTTTCGTTTAGGTACTCGGTATCGT
ACTTTTGTGAGGGAGATTAataccaatgaagtataagcccgaagggctag
aagagAATCTTTGACCtgtctcaggcaagaaaaagtgaagccttaaaatg
ggcgctgcatttttgacgacgggTTGAATGTAGCAGTCCTTTTGTTTTct
agtgatattttttttcgaaatttagtggtaaattttagtttcaatcagcc
acgtgtgtaaaaaccaggtggCTGGCGcaattttggtaggatttgttggc
ttcaaatcctaccaaggagattcacTTCTATTTCATTCAATTCATTGGTT
AATAATTTGGGCCATTAATGGATCTTTTTCGGAGGGGGGGTTATTATTTT
TAGCTGATCACTGAAATTATTCttcaatttaattatgttttcTAAGACTG
TACATTTTTGTTCTTacatttacaatttttcatctttggAAGAAACTGAG
CATAATTTTAGCCAAAACAACTAAGTAACTATTTTTCCAATTGAATTAAA
CTTCAATTAATTA
Run BLAST on NCBI

transcript from alignment at sc0000001:1156662..1170895+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000055 ID=TCONS_00000055|Name=TCONS_00000055|organism=Clytia hemisphaerica|type=transcript|length=14234bp|location=Sequence derived from alignment at sc0000001:1156662..1170895+ (Clytia hemisphaerica)
AGATGGCGTTTAAGTGCGCTAAACGCACTTAGGCGCAATTTTTTACATaa gtgagtaccaagcttaaGGGAGCTCTTGATGTTTCTTTTTGTTATGTAcc ctttttatttgtttttgaaattttattattcTAAACTTAACTTCTAAACT TAGCGGGCTAAtcttttttcgttttctttactttactttactttacttta AAAGCTACGAAGTGATGTAAAGGCTCTAGACGAACATTCATAATACATGA AGTGTAGACATCTGGTACATGCTAAATATTATTTGACAATGATGCTGTAT CTAACATTCAACCTACACGCTATCACGGTTTTACAGTTAATACTAACATT TACTCACACGTTTGCATCAAACCAAACATATATGTGGCAATCGACAAACA TCACCAGACAACAAACACATGTACAGTATATGCGATTCAAGAAATTAACT CGTGGATATAAGGTATGGGCTACACTCGGTAGACATATCGATTGTAATTT CAGTGGCTCCTCTAAAATGGAATGTGCTGATACTTGTATGAGAAAACCAA TGTGTGTTACCTGGACATGGCGAGAACATTATGGGTTATGTCGCTGTTCT GCCGAAGTATACCGTGTCTCTCCTACTTACATTTTACAGGATAACCAATT TGATGCTTATGAAATTTGGGTAAGTTTATATTTATAATCTTTAAAGCAAA TAATATATGCATTTAGAGGGTTTTATGACTTCGGGCTAACTCCAGTAATG TCTCCCACCACACTACTCCTCCTCGCTGATTTTTGTTTTCGATTTCTGAC CATGGAGACTTTCATTGATGTTTCTGAGTGACTTTAGTGATTTTgaacga attttgaaattttcaacaatttGGACCCAGAAGGGGTTTGAACCTGCAAA CAGAAAGTTTCCTTGTGCAGTAGTCCGATGCTCTACCGTTCGACTACAAG ACCACTGTAGATAACGATAGTATAGTTTACTGATCCAATATATGGCAATA GTTCAAACCCTACCAGAGAACTTAAAATGCCTCAAAAGTGTACTCTCGGG AGCTCTAACCCTGATCCTAACTCATCAATAACCAACCCTAAACTTAActa aaagaaatgaaataattttgggAGACATAATAGGATTTAGTCATGAATAA ATTACTTTgggattgtaaaatttggcacATGATACCCTAGATAAGGTCGT TTGTGAAATTCTGTCAATCAAGCGACCAAGTTTGCCCAGAACAAAGATGT AAATATAAGGTAGACCAGGTCGATCTGGGGGGTCTGCGTCCCCCAAGagg tgaaaaatatttgatggtgGTTTTGGGTTGCTAAGATGCTATATTTTCAG GAATGAGTCGGTAAATAGGCTGTTAAGGGGGCTAACTAAAATGGTAAGCT AGGTAAGTGGGGGTGTTTTTAGCCAAAATACCAATTTGTAAGGGATTTTG CTTGACACTTGAAACACCATGGTAACTTAGAAGTGCGATTCTGCACTATC TAAAAATCGTTATTGCTTGAAACTTTCCAAATATGTCACAAAtaggtaaa ataaaattttgaaaaaagaaaaattcaaaaatatttaccaGGGGGTTCTG TACCAAAGAAAACAGGGGGTAAAACACGAAAAAACNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTCCAAATATGTTACAAAtaggtaaaataaaattttga aaaaagaaaaattcaaaaatatttaccaGGGGGTTCTGTACCAAAGAAAA CAGGgggtaaaaaacgaaaaaaacccCCAAAATCGTATTTTTTCAGTAGA AAAGTGGTCATAGGCAAACGAAAAACTGTTTATGATACTTCAAAGGTTAT GTGGTGATAGATCGTGATTGCTCTCATCATAATATCAGGATTAACTATCC ACTGGGGGCTTAATTCTttattttcagggggtaaaacttgcaaaaatact cattttttgaccaaaattcaaatttttgagcTAATGTCTCGCGATTAACC CCTCAAACAGTCTACAACTATGAAAATTCCCAATAAAAAGCCTTTAAACT AATAAATTTATCTGTTTCTAGGttagaaagtttcaaaatatctcaaaatc gGGGGTAAAATGtcttaaaatattaaatttttacaaaatatcacaatttt ttaaaaattaaaatcaatttttggacaaaaaaacaaaatcataagTCATA AccagttttcttgattttaggGCGAAAATTGCAAAAACACCTTCTTTTCG ACAAAAACTGGTAGTCCATAAGACTTTCAAATCGGCTAAAAGTAACAGCT TTCTATGAAAAATATACTGAGACAACGTAATAAAAAAGTTTATCATAATA TCAATAGCTTTAGAATTATCCATAATAAACCAATCATAGCGATGTCAAAT TAAACAACAACAAATCTTACACCTTCATATTATTTAGTTCTCGTCGTCAT CCTCAGCTGATCTCTTCATCTTCGTCTTCATCCGATTCGTCGTCGGAAAT TTCATCTTCTCCAACTTCAGCTTCTTCGCTGTTGTAGGTCGCATCACAAA GTATCTCCTCAACTTTAAGGGGAAAGATTACCTCGTCAACCCAAATTGTA GATCCGTCGTTCGACCAACCACTTTCTGTAATATCTCCTTGTTAACCAAC TTATTAATGATGATTTCCAAAGTTTGCTAACGTAGTTTGCCTTCTTCGAG TGGAGAATCAAAATTGACTGAGACGGAGGAAGCATGGCCATATCGataat ttttctgcttttggtgtacttcttttcaaacatttttgctCTCGCTACGT TGACTGATGTTTCTTTAGGATAACCATAAAGGGCGCAGACGAATCGTTCC AAATAATTTTGAGTTTCTTCTTCCAAATTCCATGATTCTCCCAAGCGGCG AAAAGCTTCCACGAAATTTctattcttcttcattttattGAAGCAGGTTG ATTTTCCTTCTTTGAAGAATAATGATTATATGTAATCGTTTCCTGTAAAG GCGTGGAAACCACTCAAAGATGTTTTGTACTTGACAGCATCTTTGCCAAG GTTGCCTGTCCAAAACCCTTTCCGTGTCTTCCCTTTGCCGTAGTCAAGAT AGATTTTGGTTGGACTTAGAAGACATGCTGCAAGAACAAAGATGTCAGTG TCTGCAGATGGAGATCTTAAGATTACTTTCGCTTCGGGATTTTCTTTCAG GACATGACTGCAGTGAGGGGTGACCTTTGAGTCAGCTTCCTCTTGATCAG ATGACAAATTCTCTGAAATAGTGACACCCGTTCGACTAAGACAATACGTA ACACCTTCTTGAGAAAAATAGACCTTCGAACAATTTGTGGTCTGCAATAC TCTCTGATAATTACTTCTCATTACTTCTGACATCAGCTCAaccaattttg ttttgttttcaacattCCTCATGAAGTCTCCGAAGTCATAGGGAAATATC GATTCCTTGGATGCGATCATAACTTTTTGATCTTTACCACGCTCATTACG TTCATCACCTTTGATCGAATTGGATCTGTATGTGTCAGCAACAATATCAA TACGGTTGTACCATTTTGGCAGGTCTCCAATGAATTTCGTCATAGTCCAA ATAGCAGCAATCAGGTCAATGACAAAGGACTTATCTTTCTTCTTGATAGA CTTCAGTGAAACATCTGATCTAGGATCTTTCTAGTTGTCGTATCTGCAAC CAGTAGTTTCATTAGCCTGCTTTTTGGTGTTTCACGTTTTTGGTGTTTTC CATTTCCATGTGCAAGACTGAGAGGTGCAGGAGCCAATGGGTAGACAAGA GCTGATGGAATATCAATTGCGCGTTCATTTCTAATTGAAAACGAAAGAAG GGTACCAATGATATCCCGATTTACTTCTATTATtgtatttgcaaaatatt gacatttaatgACTGATGTTGAATATGTCTTGAATATGTAGATAGGAACT CGGCTCAATCTGTCTTTCTTTGGATTTCCTTTGACACTTGACTGCTCAAA TTCGTCTCGCATTCTCTTCCCGTCttcttctattttcaaaatcttgcttG CAAACGATTCCTCAACCATTTCCCCAGAGAAGAAAAGTTGTATAGCCCCT CCAGACCTAAATCAAAAGGATTGATGTATTTCCCTTTCACCACCTGAAAA ATTTTTGTCACATGCTTTTCACTGGCAAGAATCTTGGACGGTCTCATAGG CTTGTATTTATCACATAATCTTAAAGTGCCAGCCATCTTTTTTAATTCAG AGGTTGTTTTAGCTATGTCAGCTCGATTCAAACACCATTTTAGAACTGCG TCCTTTTTGTTCGCAAAAAACTTGATTCCACCTGAAAATGACGAATTTTT CTGTAGTAACCCTTCTATTTGATTTATCTCCAGTGATCAAACGCGAGGTA AATACATATTGATTTTGATTGGGAAAGATTTCATATTGAACCTAATTCCC TATTAATGTAATTATTTATCTGAGGTTTTAGCATCGCGGTTGATCGACTG TTCTCCACGCTGATCTGTGGAAGGATAAGCTGATTGAGCTTGGACAGAAA TTCCAGACATTTTGAAGGTCTCTGTCAAGCCAGGGTATCGCAGATCAATC TCCttcattacacgtttttttttttatgaacgtcaaaaattttcgaagcc ttcagatgttcttagttttttgaatttgaagcctaaaaatgttcttaaaa tgttcttattttcagcattttttgagcattttgatgtaatttcttaagaa aatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtccaaagccttagaatgttcttagaatgttctta aatttttgggcctcgaagccttatgttcttatatagtttgttcttataaa aaaaaacgtgtatttggaCATACCACAAGACATATCTTGCATAGTTGGTT TTGTTAAATGCAAAATAGAAAGGCAACATCTCATCCCACGCAAGGCAGCA TCTCATCCCACGCTTGCAATCTCATCTCGAAGTTGTTTGTTTGGACGGCT GTGTGAATCTTGTGCTGAATTCTCACGATGTTCAGGTGTACCATCCAAAA CTAGGCTGTTTTGCCGACTTTCCAATCTCGAACATCTTGACCGTAGCGCT CGTATCTTTGTAAGAATTCGTTCCAATTCGGAGGTATCATGCTGTCAAAG CTCTCAGGGTCAGAACTGATGTCGTACAAACAATCGGGCACTTTCGGagc tttttgaaataaaactcacGCAACCCACGCACTTAAACATGATAACTTAA ACACGGCACTTTTCAGAGATTCTTTTAacaaaaatgttacaaaatttaCA TTACAAACGTTTTGAATAACTGAAAACACTCTCTAGATTAGATTGAAAAT CCAACGTAACACATTGTGTAATGAGATAAGGCTGATTATTGCTGATAATT AGATATAAATTGGTCACAAAAGGTTTCTAGATCTATAAAGGTGTCATATT TTTCTTTCGATTAAACTGACTACAACCAAATTTGAGCCTAATTGGTGTAA TTCTGATTTGTGTGAACCGCACTGTCATTAAAGTCTCTTTGGTagtcttt aattttgaaaaaaagtgatttttttgtaaagATCTAACATTTTTGGACAT TTTACCCCGGATTTGaggtattttgaaattttctaactTAAAAACTGATA AATTTATTAGTTTAAAGGCTTTTTATTGGGAATTTTAATAGTTTTAGACT GTTTGAGGGGTTAATCGCGAGACATTAgctcaaaaatttgaattttggtc aaaaaatgagtattttttgcaatttttaccccctgaaaataaAGAATTAA GCCCCCAGTGGATAGTTAATCCTGATATTATGATGAGAGCAATCACGATC TATCACCACATAACCTTTGAAGTATCATAAACAGTTTTTCGTTTGCGTAG GACCACTTTTCTGCTGAAAAAATACGATTTTGGGGGTTTTTTTCGTGTTT TACCCCCTGTTTTCTTTGGTACAGAACCCCCtggtaaatatttttgaatt ttcttttttcaaaatgttattTTACCTATTTGTAACATATTTGGAAAGTT TCAAGCAATAACGATTTTTAGATAGTGCAGAATCGCACTTCTAAGTTACC ATGGTGTTTCAAGTCTCAAGCAAAATCCCTTACAAATTGGTATTTTGGCT AAAAACACCCCCACTTACCTAGCTTACCATTTTAGTTAGCCCCCTTAACA GCCTATTTACCGTCTCATTCCTGAAAATATAGCATCTTAGCAACCCAAAA CCACCATCAAACATTTTTCACCTCTTGGGGGACGCAGACCCCCCAGATCG ACCTGGTCTAAGGATAGAAAGTTAGATAGACATTTTACAAATTACGGcac gttttgaaattattgccatgatgattaactcccagcggattttattacaa ctacttattcttttcataaaaaaccaTTTAATGTCTCCAGGGATGtgatc accatggtaattgtttgaatacgaggcaagtgatgttcgtgacgtaattt atgaaaaggtctattatggaATTTTTTCGTTTCAGAATCCCTGTATGCAG AATGCATTGTTATGTGAACATGGAAGTATTTGCTCACCGAACCGCTTGAC TAAAACATATCAATGTCTCCATTGTTTCCCTCCATACACTGGCAAACATT GCAATGAAACTGGTAATTATTATTATTGATATGCGTAAGCCAAGATTACG TCGTTTTTCATATCGAAAACACTGGAATTTTACCCCTGagtgttacacgt tttttttttaagaaaaacgaggttcagaatgcctaaaaactaagaaacat gctgaggctgagaatgagaaaataaaattttttaattcgttttttaagAG CTTTGCaaacaaaacaaatgttttttatttctttccatgaaaaataggct gtcaatctaatcactgtagaaagaattcAACAAAGATGAAgggcaaatat taccatattaatgtctagcagactgtattaATATACATATTTACTATTGA CGAATTCCTCAGAAatctccaagtgtaattgaaattggtttctttcaaaa aaatcttctacatgattcccaaatgtataacagtaattactaagtTATTT ATTATGGTAATGTTACTttaatggaatcgaaataattGACCAAATCTTTT TGTTACGATTCTTGACTCTTTTTAAAAGGCGttgatgacatttttaagtt gtgttttcaatgacgcgaaaaaaataatatcaactttgaacttaatccaa gatcttaaatggtcgtcatggttacttttctctgccttgattgcgcgctg aatagaatccgGATGGTCGGCACCGGGCGATGTATGATTTCAGCCTGTGC TTTCACAGTAAAGATTGGCTCCactcatttaccttgagtgccacCCCCCC CTCCCCACGGTTTTATCCCGTGGAATCGAAAACTTCGGTTTCTCTGTGTA AATTAATTACAATTTAAGATTTAACCAATGCTGGGCTACATATTACCAtc tagtagggggaaatttgttcgtttttttgaggtcgctcgatttttttagt caaagcacttgttatacatttttggaaagctaaggggtaggggaatcaaa ataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNtgctttgactaaaaaaatcgagcgattttacaaatt tccccctactaatccTTCATTTTAAACATAAAACCTCAAAGGCCAGAAAT TTGAAGTTATCTCTTGTGTAGACTGTAGCAATGCTGGTTTAATTTTCTTG ATTATTTTGTCATTTCTTCTCCCTCTCTCTTTGAGGCGGCCGGTCGGGCA AGGGACGCCAAACCGGGTTCTAGACTTTTCAACCTTTCCTTTTCTGCTAT ACTTAACTATATGGTTAGACTTTGTGCCtatgttttaatttctttcttct tgttaAGCTGACAGGTGACTCTAGAGTGGCAGGAGATGCTTAATCAAGCT AGCGCACCTGATCTCAAACTTCGGTCTTCAGCTTATCACTTCCTTTTGTG TCTTGTGCAttccttttgttttttactttttggacctaccccggtggggt ggaggtcctataaattaacccatgttcgttagttagttagtacgttagtt accaacttttctcgagattggctcatttaatttttctgattttttgcaca aaggtgttactataaaccctcgaatgtgacggagcccgattttcgaaaaa aaaaattttccggccggtagaaccggaaatgtcccgaaaaaagcggtttt ttgagattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNaatagatatataaatcgaaatttaaaattatac attacttccattaaattctaattattcgttttataaataggtaggtccat taaagtattacttgttttatttctttcttcATTGGGTTTTTATTACAGAT TGTCATGGTTAGTCGCTAGTTTGTATCTTCTTCAGTGTATATAACTTcac tatatttctttttttaaggtCCATCGATACCCTCGACGATTTCGCAAGGT AAGATAAAAAAGGGTGCGACAATTTCGTTGCTCCGAGGAAAATAGAGATC TTTCAGGCTTTTGGTGGGTTGTTTAACgaaagaaaatattattattattc tagACGTCTATTGGtaaattttgaactttgaaatctattttttttaaatg caatGTAAAGATACATCCAGGTTTCCTTGTGAAAAGGGAAGGTCTTTGTG GGGTTTTTATGCATGATCGTTGATCTTGAAAATGTTATCTTAAATCGTTT TTGGTTGGTTTTATGTTCTATCCAcaacagggtgtccggaaaaaagtatc gagctgaaacacaactatgagtaaaaataatttatgtgtatgttcacaaa gttgtattttaaggcttggggacacgagaagttttttttcacgtttgtgc aatgcaacatgcgggaacatgctccatcccaccaacacaagaaaaaagtg cttgtcctatggtttctttttttgttcatgggacaaaaagtgagggaaat acctaaaagacacgctgattttgtcccaaaAAGaagattcgaatcaattt tgctccattgtcccagggacaagaaagaaagaaaaatggggttgAGACAC GaaaaagcgtttcaggttggtgggatggtgtccccaagcctttaagtTCC CCCTCCTTTTTTGAAGATGTATATTTTGTCCAACAAAGGATTTTTAAAAA AGGTTATCGATTAATGCCTTTTAGAAAACAAACTTTTCTATATAATAAGG CTGTGATTTCTCATATTTCGGCGTGGATCATCACAAACTTATCTCcacaa taatattttcaaactcGATGCTTTTTTCCAGACAGCATGTACAATCTGGA TAACGTTTTTTTACAAactctttattttcattgtttttaaaagtagaaaa aaactttttcaaaagtcgTTTTTAAACTATTATCCAATTGACAGTGAGCT GATTTCACAAAATTCGTTTACCAAATCAATCATCTATTTTTAAGACATTT TACTTGGTAAAAACGCTTCCTGTATTGCTTTGAAAGAACATTTCAATATA CCAAACGGTTTGCAACAATACACAATACATCCATGGAGAGACCAACGAAA AATTCATATAAAATGTTCAGGTTCGGAAGATAATTACATTTACTTTGAAG GAAGAATATTGTtccaatttttgtaaattttaggTAGACtcgctaatttt ttttccaaagctATTTCGcgagattttattttatttcaagtaTCATTTCA TCAGATAGATATGCAGTTCTTTAAGGAACTAAAAATttgattcgaattac agagagtaatttcaGGAAAACTCGAATGATAAGAATTTGAATTAGAACGA GTTGACTGTATGTCTACACTTTTCTGAAACTTTTAAACTAGctgatatat tttctttttctttttaaaatcaggAAAAGTTATGAGATTTACCCGACTAG ACACAAGAGACCAAGCTCCAGTGAAGGAACTAAAAGCTGCGTCAATGGAA GATGGTCTTGTGCTTGAGAATAATTATCGTGCGCATGCGTCCTTTCTACG CATGGCTAAAATACTAATGAACTTTGAAACCATACGCATGAAATGTGTTC GAAACACAACAGAATTAGTTTCACTGGGCAACAAAAGACAAGCTTCTGAT GCCGATTTCAATGTTATACGATATTTCTCAGGAGAAAGTGATAGCCGACC TGTGGAGACGACAAGTATTTGGAGATCCAGGCTGAATGGGGTGTGGGATG ATTACCCAATTGATGCAGTCGACGACCTGTTATCTGCTGACAATGTTGAA AAAGAATATCGACCTTTCAAAGATATTTATATAGGTAATGATGGTTTAAA AATGACATTCACAAATGAATCACAACAATGCTTTGGTCCTGAAGGCGATT TTAACCATTATTTACTCGAAGTTTATTGATGAGAAATGGAAAcatatttc tgacaaaaaaatGACCTTTCAAAGATATTTATATAGGTAATGATGGTTTA AAAATGACAGTATNCGACAGAATAATGACCTTTCAAAGATATTTATATAG GTAATGATGatttaaaaatgacattcaCCAATGAATCGCAACAATGTTTT GGTCCTGAAGGCGATTTTAACCATTATTTACTCGAAGTTTATTGATGAGA AATGGAAACATATTTCTGAAAGAATATCGACCTTTCAAAGATATTTATAT AGGTAATGATGGTTTAAAAATGACAGTATGATACTGGTCCGAACTTCCTA TATCTGTAACCGAAAAATGAATCGATTTTAGACACCGAAGTTTTTGCTTT CGTTTAGGTACTCGGTATCGTACTTTTGTGAGGGAGATTAataccaatga agtataagcccgaagggctagaagagAATCTTTGACCtgtctcaggcaag aaaaagtgaagccttaaaatgggcgctgcatttttgacgacgggTTGAAT GTAGCAGTCCTTTTGTTTTctagtgatattttttttcgaaatttagtggt aaattttagtttcaatcagccacgtgtgtaaaaaccaggtggCTGGCGca attttggtaggatttgttggcttcaaatcctaccaaggagattcacTTCT ATTTCATTCAATTCATTGGTTAATAATTTGGGCCATTAATGGATCTTTTT CGGAGGGGGGGTTATTATTTTTAGCTGATCACTGAAATTATTCttcaatt taattatgttttcTAAGACTGTACATTTTTGTTCTTacatttacaatttt tcatctttggAAGAAACTGAGCATAATTTTAGCCAAAACAACTAAGTAAC TATTTTTCCAATTGAATTAAACTTCAATTAATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000028XLOC_000028Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000055-exon-sc0000001-1491911889:1156662..1157330TCONS_00000055-exon-sc0000001-1491911889:1156662..1157330Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1510915933:1156662..1157330TCONS_00000055-exon-sc0000001-1510915933:1156662..1157330Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1575043694:1156662..1157330TCONS_00000055-exon-sc0000001-1575043694:1156662..1157330Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1491911889:1163397..1163523TCONS_00000055-exon-sc0000001-1491911889:1163397..1163523Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1510915933:1163397..1163523TCONS_00000055-exon-sc0000001-1510915933:1163397..1163523Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1575043694:1163397..1163523TCONS_00000055-exon-sc0000001-1575043694:1163397..1163523Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1491911889:1168030..1168059TCONS_00000055-exon-sc0000001-1491911889:1168030..1168059Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1510915933:1168030..1168059TCONS_00000055-exon-sc0000001-1510915933:1168030..1168059Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1575043694:1168030..1168059TCONS_00000055-exon-sc0000001-1575043694:1168030..1168059Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1491911889:1169056..1169181TCONS_00000055-exon-sc0000001-1491911889:1169056..1169181Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1510915933:1169056..1169181TCONS_00000055-exon-sc0000001-1510915933:1169056..1169181Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1575043694:1169056..1169181TCONS_00000055-exon-sc0000001-1575043694:1169056..1169181Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1491911889:1169485..1170895TCONS_00000055-exon-sc0000001-1491911889:1169485..1170895Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1510915933:1169485..1170895TCONS_00000055-exon-sc0000001-1510915933:1169485..1170895Clytia hemisphaericaexon
TCONS_00000055-exon-sc0000001-1575043694:1169485..1170895TCONS_00000055-exon-sc0000001-1575043694:1169485..1170895Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1156662..1170895 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0.236884 0.791134 0 0.159993 0 0 0 0.256579 0.371937 0.837516 0 0 0 0 0 2.25308e-05 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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Spatial Expression
in the tripal_feature_cv_term.tpl.php