TCONS_00000052 (transcript) - C. hemisphaerica

Overview
Name
Unique NameTCONS_00000052
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2373

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000052 ID=TCONS_00000052|Name=|organism=Clytia hemisphaerica|type=transcript|length=2373bp
ACCACCAATCAACCCTCAAAACCCATTGgaggaaaacaaaatcaaattca
TGCAACCTGACAAAAGGCTTTCGTTGCCCGACAATTTATTCGTCTCCACT
CACCAAGGTGATAAAAAGAACCGACGACATTCCGACGACATTCGATCAGT
TGTCGAACTATTTTCCATACGTCGAAACACCATGTGTAGCCTGAATTCCG
TCATCTCGAACGAGCTACGAAGTGATGTAAAGGCTCTAGACGAACATTCA
TAATACATGAAGTGTAGACATCTGGTACATGCTAAATATTATTTGACAAT
GATGCTGTATCTAACATTCAACCTACACGCTATCACGGTTTTACAGTTAA
TACTAACATTTACTCACACGTTTGCATCAAACCAAACATATATGTGGCAA
TCGACAAACATCACCAGACAACAAACACATGTACAGTATATGCGATTCAA
GAAATTAACTCGTGGATATAAGGTATGGGCTACACTCGGTAGACATATCG
ATTGTAATTTCAGTGGCTCCTCTAAAATGGAATGTGCTGATACTTGTATG
AGAAAACCAATGTGTGTTACCTGGACATGGCGAGAACATTATGGGTTATG
TCGCTGTTCTGCCGAAGTATACCGTGTCTCTCCTACTTACATTTTACAGG
ATAACCAATTTGATGCTTATGAAATTTGGAATCCCTGTATGCAGAATGCA
TTGTTATGTGAACATGGAAGTATTTGCTCACCGAACCGCTTGACTAAAAC
ATATCAATGTCTCCATTGTTTCCCTCCATACACTGGCAAACATTGCAATG
AAACTGgtCCATCGATACCCTCGACGATTTCGCAAGACATTTTACTTGGT
AAAAACGCTTCCTGTATTGCTTTGAAAGAACATTTCAATATACCAAACGG
TTTGCAACAATACACAATACATCCATGGAGAGACCAACGAAAAATTCATA
TAAAATGTTCAGgAAAAGTTATGAGATTTACCCGACTAGACACAAGAGAC
CAAGCTCCAGTGAAGGAACTAAAAGCTGCGTCAATGGAAGATGGTCTTGT
GCTTGAGAATAATTATCGTGCGCATGCGTCCTTTCTACGCATGGCTAAAA
TACTAATGAACTTTGAAACCATACGCATGAAATGTGTTCGAAACACAACA
GAATTAGTTTCACTGGGCAACAAAAGACAAGCTTCTGATGCCGATTTCAA
TGTTATACGATATTTCTCAGGAGAAAGTGATAGCCGACCTGTGGAGACGA
CAAGTATTTGGAGATCCAGGCTGAATGGGGTGTGGGATGATTACCCAATT
GATGCAGTCGACGACCTGTTATCTGCTGACAATGTTGAAAAAGAATATCG
ACCTTTCAAAGATATTTATATAGGTAATGATGGTTTAAAAATGACATTCA
CAAATGAATCACAACAATGCTTTGGTCCTGAAGGCGATTTTAACCATTAT
TTACTCGAAGTTTATTGATGAGAAATGGAAAcatatttctgacaaaaaaa
tGACCTTTCAAAGATATTTATATAGGTAATGATGGTTTAAAAATGACAGT
ATNCGACAGAATAATGACCTTTCAAAGATATTTATATAGGTAATGATGat
ttaaaaatgacattcaCCAATGAATCGCAACAATGTTTTGGTCCTGAAGG
CGATTTTAACCATTATTTACTCGAAGTTTATTGATGAGAAATGGAAACAT
ATTTCTGAAAGAATATCGACCTTTCAAAGATATTTATATAGGTAATGATG
GTTTAAAAATGACAGTATGATACTGGTCCGAACTTCCTATATCTGTAACC
GAAAAATGAATCGATTTTAGACACCGAAGTTTTTGCTTTCGTTTAGGTAC
TCGGTATCGTACTTTTGTGAGGGAGATTAataccaatgaagtataagccc
gaagggctagaagagAATCTTTGACCtgtctcaggcaagaaaaagtgaag
ccttaaaatgggcgctgcatttttgacgacgggTTGAATGTAGCAGTCCT
TTTGTTTTctagtgatattttttttcgaaatttagtggtaaattttagtt
tcaatcagccacgtgtgtaaaaaccaggtggCTGGCGcaattttggtagg
atttgttggcttcaaatcctaccaaggagattcacTTCTATTTCATTCAA
TTCATTGGTTAATAATTTGGGCCATTAATGGATCTTTTTCGGAGGGGGGG
TTATTATTTTTAGCTGATCACTGAAATTATTCttcaatttaattatgttt
tcTAAGACTGTACATTTTTGTTCTTacatttacaatttttcatctttggA
AGAAACTGAGCATAATTTTAGCCAAAACAACTAAGTAACTATTTTTCCAA
TTGAATTAAACTTCAATTAATTA
Run BLAST on NCBI

transcript from alignment at sc0000001:1153534..1170895+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000052 ID=TCONS_00000052|Name=TCONS_00000052|organism=Clytia hemisphaerica|type=transcript|length=17362bp|location=Sequence derived from alignment at sc0000001:1153534..1170895+ (Clytia hemisphaerica)
ACCACCAATCAACCCTCAAAACCCATTGgaggaaaacaaaatcaaattca TGCAACCTGACAAAAGGCTTTCGTTGCCCGACAATTTATTCGTCTCCACT CACCAAGGTGATAAAAAGAACCGACGACATTCCGACGACATTCGATCAGT TGTCGAACTATTTTCCATACGTCGAAACACCATGTGTAGCCTGAATTCCG TCATCTCGAACGAGGTCAGTCTAAAGCCAGTTCATTCTATACAATCTTTT GGGCATCTGTCGATCGCTCATAATATACCCTCAAACAGAGGCGCTCCCAC AAATCTAACAGTCATTCAAGTCTATCAAAACCCGACAAATACCGACGAAC TACAACGTCAGTTTCTAAATAAACCACAAACGACGAATTTGACGAGTGAC GAAATTCGGCATATACGAGACAGGCTTTATACACCACTGACAACTGCACA CAAAGATAGCATAATAGCGGACTGTTTACCGTACAACCGGACGGACTTAG AGCCGGACTTAATCTCAAGTGCAGTTGAATTGAGACAAAGTGTTAGAAAT CATGAATTTTATAACTCGATTGAATTGATTGAGTCATTAAGTATCCATAG TACGAAAATTTGAGATAGTGCACCCCTGTATAGAATTGTAATATGAAGAT ATCTAATCCACAGATCCAGAACTATACTCCGAACTTACTCAATAGATTAA CAATTTCGCTACAGAGGACCTGGTCAATGCAGTAGCTTCAGGCGGGGGAG GGGGTATTTAACTCCCTTTTTAGAAAGTGATCTGTTTCTAAAACTGACTA TTTTCGTTTCTCTTTATCTGAACAAATTCTTTGAGTTTTTAGTTCTAAGG GAAGAAATATTTGCGCAAATTAATTTTGCGGCTCACAGCTTTAAATTTGG AAGTCTCGGTCAGTTTCATTTTGCGGTTGAGAGagctttttgtttataaa atggCCTATCTTGCCATTAATAGACCATTTTAGAGGTGTTTTTTTAAATC CTGTGAATATTTGTGTTTCgctgaatttaatttcgtggatttgtcaaaaa agtgcgaaattaaattctgcgaaaatttATTCCCGCGAAAATGCTTCACG CGGTACAATACCGAATCTCGGGAAGTTAGATCTCAATGAGTTGGTTGGCA ATGGTCAATTCgcttaccctgagtatcagaggttaagttttcaaagaata tattaacctcggaagaccaataataggaattttatcgcgcatgtgtcaat ctaatcactgtagaaagaatcaaagatgaagagcaaatattaccttatta atgtctagcagactgtatcagtatgcagtttactatttatatgaattccc cagaaacctccaggtgtaatcgaagtgagtttctttcaaaataaatcttt tacatgatccccaaatgtataacagtaattactaagctattgattatgga aatgtcacttttaattgaatcgaaataatagacagactttatgttatgat tctctatcactgactctttttaaaaagcattgatgatattttttgttgta ttttcaacgacaggaataaaaatatcaactttgaacttcatccaagatct taaatggtcgtcatggttacttttgtcttcgttgattgcgcgatgaatct ctattcgtcggcacagcgtcaatatatgattttgacctgtgcttttcatg GTACAATTCGCTACTTGTTAAAATGAATCGgcataatattttttgaatca atattatttctatgttttttttttccttttccgTGGAGACATCCTGTATC TTTTTCATTGGGCCACCCCCACAGTCAAAAATTGAACCTCCTTGACAATT CATTCAGTGTTACTATGTCactttcaacacaaaatcaaaatagtTCAATA TTGAAAGGTTGAATCAAAATTATACAATAAAGTTTCACAATCATATGTTT TAAGTTGAATCGATGAAACTACATTTCACATGAAATTATTTTCAGTCATC TTCATCAATAttattcttatttaaaacaaaatcaacttatTTTTTCGATC ACTGACAGGTTCAATTGGGAATGAATGTAAACTAACCTCGTTTCGTTAAC GTACGTTTTTAGCGTGTTTTTAATTCGTGAATTAAATAATGGTTTTCTGC TCGTCAAATATATTCATGaatgaaatattatttaaatgttttgtttttac ataagtgttcccgtttcatatcagacacatatttcatatcgggacagCGT CTTCCTTCCTTTTGTTATGTTATGCTggtataagcaaaaaatattttttt cctctttcagACCAATCTTGCTCCTCATTTGTGTCAATCCAATTCGAAAA AGCTTAGTTAAAATTGATCAGTAAGCAAACGGTATCACTCTAAACAAGac ctttaaagtaaaaaaataagaaagagTTGAAAGCGAAGattcaaaatgaa gaagacaaTTACAATTAGTGAAGTTCAAATCatagtttatttttttgttt cttcttcatcattcatctttgtttttcagGTCTTTGATATTAACACTCCA CTCACAAATTTCCTTTCAACCAATTCATTCtcatttgaattctttttgat atcatttaaaaaaaaacaataaatgaACGTCAAACGTcatcactttgaaa aaaattctcaaaaataatgacgtctaaaaacgctgttttctgctgttttt tggggtcaatcacttgttagctttgtatcataactttatattgagtaaat attttagtgaaatttcttcacagtgacgACCTCTtaaatcaaagaatctc tccagtgaaaatgaaagttatggcgcttctctaaaagatcttcatttttt tcttcttcattttcatcttcgttttcagaatttttttaaaaactttttta tttcaaattgttccactcacaaatatctctccaacgataccaaatttata aagattgaagaattccttcaaaagttataggtaaaagaaaaaagagtgca cacttatcgtgaatagactttaattacTTCCAAACTattcaattcttttg aaatttgaatattgcatctaagtgcacCTAGCTCCTTTTTCCATATCTTT CATTCAAATCACTTTGTAGTGAGTACATAGATGGCGTTTAAGTGCGCTAA ACGCACTTAGGCGCAATTTTTTACATaagtgagtaccaagcttaaGGGAG CTCTTGATGTTTCTTTTTGTTATGTAccctttttatttgtttttgaaatt ttattattcTAAACTTAACTTCTAAACTTAGCGGGCTAAtcttttttcgt tttctttactttactttactttactttaAAAGCTACGAAGTGATGTAAAG GCTCTAGACGAACATTCATAATACATGAAGTGTAGACATCTGGTACATGC TAAATATTATTTGACAATGATGCTGTATCTAACATTCAACCTACACGCTA TCACGGTTTTACAGTTAATACTAACATTTACTCACACGTTTGCATCAAAC CAAACATATATGTGGCAATCGACAAACATCACCAGACAACAAACACATGT ACAGTATATGCGATTCAAGAAATTAACTCGTGGATATAAGGTATGGGCTA CACTCGGTAGACATATCGATTGTAATTTCAGTGGCTCCTCTAAAATGGAA TGTGCTGATACTTGTATGAGAAAACCAATGTGTGTTACCTGGACATGGCG AGAACATTATGGGTTATGTCGCTGTTCTGCCGAAGTATACCGTGTCTCTC CTACTTACATTTTACAGGATAACCAATTTGATGCTTATGAAATTTGGGTA AGTTTATATTTATAATCTTTAAAGCAAATAATATATGCATTTAGAGGGTT TTATGACTTCGGGCTAACTCCAGTAATGTCTCCCACCACACTACTCCTCC TCGCTGATTTTTGTTTTCGATTTCTGACCATGGAGACTTTCATTGATGTT TCTGAGTGACTTTAGTGATTTTgaacgaattttgaaattttcaacaattt GGACCCAGAAGGGGTTTGAACCTGCAAACAGAAAGTTTCCTTGTGCAGTA GTCCGATGCTCTACCGTTCGACTACAAGACCACTGTAGATAACGATAGTA TAGTTTACTGATCCAATATATGGCAATAGTTCAAACCCTACCAGAGAACT TAAAATGCCTCAAAAGTGTACTCTCGGGAGCTCTAACCCTGATCCTAACT CATCAATAACCAACCCTAAACTTAActaaaagaaatgaaataattttggg AGACATAATAGGATTTAGTCATGAATAAATTACTTTgggattgtaaaatt tggcacATGATACCCTAGATAAGGTCGTTTGTGAAATTCTGTCAATCAAG CGACCAAGTTTGCCCAGAACAAAGATGTAAATATAAGGTAGACCAGGTCG ATCTGGGGGGTCTGCGTCCCCCAAGaggtgaaaaatatttgatggtgGTT TTGGGTTGCTAAGATGCTATATTTTCAGGAATGAGTCGGTAAATAGGCTG TTAAGGGGGCTAACTAAAATGGTAAGCTAGGTAAGTGGGGGTGTTTTTAG CCAAAATACCAATTTGTAAGGGATTTTGCTTGACACTTGAAACACCATGG TAACTTAGAAGTGCGATTCTGCACTATCTAAAAATCGTTATTGCTTGAAA CTTTCCAAATATGTCACAAAtaggtaaaataaaattttgaaaaaagaaaa attcaaaaatatttaccaGGGGGTTCTGTACCAAAGAAAACAGGGGGTAA AACACGAAAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAAATAT GTTACAAAtaggtaaaataaaattttgaaaaaagaaaaattcaaaaatat ttaccaGGGGGTTCTGTACCAAAGAAAACAGGgggtaaaaaacgaaaaaa acccCCAAAATCGTATTTTTTCAGTAGAAAAGTGGTCATAGGCAAACGAA AAACTGTTTATGATACTTCAAAGGTTATGTGGTGATAGATCGTGATTGCT CTCATCATAATATCAGGATTAACTATCCACTGGGGGCTTAATTCTttatt ttcagggggtaaaacttgcaaaaatactcattttttgaccaaaattcaaa tttttgagcTAATGTCTCGCGATTAACCCCTCAAACAGTCTACAACTATG AAAATTCCCAATAAAAAGCCTTTAAACTAATAAATTTATCTGTTTCTAGG ttagaaagtttcaaaatatctcaaaatcgGGGGTAAAATGtcttaaaata ttaaatttttacaaaatatcacaattttttaaaaattaaaatcaattttt ggacaaaaaaacaaaatcataagTCATAAccagttttcttgattttaggG CGAAAATTGCAAAAACACCTTCTTTTCGACAAAAACTGGTAGTCCATAAG ACTTTCAAATCGGCTAAAAGTAACAGCTTTCTATGAAAAATATACTGAGA CAACGTAATAAAAAAGTTTATCATAATATCAATAGCTTTAGAATTATCCA TAATAAACCAATCATAGCGATGTCAAATTAAACAACAACAAATCTTACAC CTTCATATTATTTAGTTCTCGTCGTCATCCTCAGCTGATCTCTTCATCTT CGTCTTCATCCGATTCGTCGTCGGAAATTTCATCTTCTCCAACTTCAGCT TCTTCGCTGTTGTAGGTCGCATCACAAAGTATCTCCTCAACTTTAAGGGG AAAGATTACCTCGTCAACCCAAATTGTAGATCCGTCGTTCGACCAACCAC TTTCTGTAATATCTCCTTGTTAACCAACTTATTAATGATGATTTCCAAAG TTTGCTAACGTAGTTTGCCTTCTTCGAGTGGAGAATCAAAATTGACTGAG ACGGAGGAAGCATGGCCATATCGataatttttctgcttttggtgtacttc ttttcaaacatttttgctCTCGCTACGTTGACTGATGTTTCTTTAGGATA ACCATAAAGGGCGCAGACGAATCGTTCCAAATAATTTTGAGTTTCTTCTT CCAAATTCCATGATTCTCCCAAGCGGCGAAAAGCTTCCACGAAATTTcta ttcttcttcattttattGAAGCAGGTTGATTTTCCTTCTTTGAAGAATAA TGATTATATGTAATCGTTTCCTGTAAAGGCGTGGAAACCACTCAAAGATG TTTTGTACTTGACAGCATCTTTGCCAAGGTTGCCTGTCCAAAACCCTTTC CGTGTCTTCCCTTTGCCGTAGTCAAGATAGATTTTGGTTGGACTTAGAAG ACATGCTGCAAGAACAAAGATGTCAGTGTCTGCAGATGGAGATCTTAAGA TTACTTTCGCTTCGGGATTTTCTTTCAGGACATGACTGCAGTGAGGGGTG ACCTTTGAGTCAGCTTCCTCTTGATCAGATGACAAATTCTCTGAAATAGT GACACCCGTTCGACTAAGACAATACGTAACACCTTCTTGAGAAAAATAGA CCTTCGAACAATTTGTGGTCTGCAATACTCTCTGATAATTACTTCTCATT ACTTCTGACATCAGCTCAaccaattttgttttgttttcaacattCCTCAT GAAGTCTCCGAAGTCATAGGGAAATATCGATTCCTTGGATGCGATCATAA CTTTTTGATCTTTACCACGCTCATTACGTTCATCACCTTTGATCGAATTG GATCTGTATGTGTCAGCAACAATATCAATACGGTTGTACCATTTTGGCAG GTCTCCAATGAATTTCGTCATAGTCCAAATAGCAGCAATCAGGTCAATGA CAAAGGACTTATCTTTCTTCTTGATAGACTTCAGTGAAACATCTGATCTA GGATCTTTCTAGTTGTCGTATCTGCAACCAGTAGTTTCATTAGCCTGCTT TTTGGTGTTTCACGTTTTTGGTGTTTTCCATTTCCATGTGCAAGACTGAG AGGTGCAGGAGCCAATGGGTAGACAAGAGCTGATGGAATATCAATTGCGC GTTCATTTCTAATTGAAAACGAAAGAAGGGTACCAATGATATCCCGATTT ACTTCTATTATtgtatttgcaaaatattgacatttaatgACTGATGTTGA ATATGTCTTGAATATGTAGATAGGAACTCGGCTCAATCTGTCTTTCTTTG GATTTCCTTTGACACTTGACTGCTCAAATTCGTCTCGCATTCTCTTCCCG TCttcttctattttcaaaatcttgcttGCAAACGATTCCTCAACCATTTC CCCAGAGAAGAAAAGTTGTATAGCCCCTCCAGACCTAAATCAAAAGGATT GATGTATTTCCCTTTCACCACCTGAAAAATTTTTGTCACATGCTTTTCAC TGGCAAGAATCTTGGACGGTCTCATAGGCTTGTATTTATCACATAATCTT AAAGTGCCAGCCATCTTTTTTAATTCAGAGGTTGTTTTAGCTATGTCAGC TCGATTCAAACACCATTTTAGAACTGCGTCCTTTTTGTTCGCAAAAAACT TGATTCCACCTGAAAATGACGAATTTTTCTGTAGTAACCCTTCTATTTGA TTTATCTCCAGTGATCAAACGCGAGGTAAATACATATTGATTTTGATTGG GAAAGATTTCATATTGAACCTAATTCCCTATTAATGTAATTATTTATCTG AGGTTTTAGCATCGCGGTTGATCGACTGTTCTCCACGCTGATCTGTGGAA GGATAAGCTGATTGAGCTTGGACAGAAATTCCAGACATTTTGAAGGTCTC TGTCAAGCCAGGGTATCGCAGATCAATCTCCttcattacacgtttttttt tttatgaacgtcaaaaattttcgaagccttcagatgttcttagttttttg aatttgaagcctaaaaatgttcttaaaatgttcttattttcagcattttt tgagcattttgatgtaatttcttaagaaaatgNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccaaa gccttagaatgttcttagaatgttcttaaatttttgggcctcgaagcctt atgttcttatatagtttgttcttataaaaaaaaacgtgtatttggaCATA CCACAAGACATATCTTGCATAGTTGGTTTTGTTAAATGCAAAATAGAAAG GCAACATCTCATCCCACGCAAGGCAGCATCTCATCCCACGCTTGCAATCT CATCTCGAAGTTGTTTGTTTGGACGGCTGTGTGAATCTTGTGCTGAATTC TCACGATGTTCAGGTGTACCATCCAAAACTAGGCTGTTTTGCCGACTTTC CAATCTCGAACATCTTGACCGTAGCGCTCGTATCTTTGTAAGAATTCGTT CCAATTCGGAGGTATCATGCTGTCAAAGCTCTCAGGGTCAGAACTGATGT CGTACAAACAATCGGGCACTTTCGGagctttttgaaataaaactcacGCA ACCCACGCACTTAAACATGATAACTTAAACACGGCACTTTTCAGAGATTC TTTTAacaaaaatgttacaaaatttaCATTACAAACGTTTTGAATAACTG AAAACACTCTCTAGATTAGATTGAAAATCCAACGTAACACATTGTGTAAT GAGATAAGGCTGATTATTGCTGATAATTAGATATAAATTGGTCACAAAAG GTTTCTAGATCTATAAAGGTGTCATATTTTTCTTTCGATTAAACTGACTA CAACCAAATTTGAGCCTAATTGGTGTAATTCTGATTTGTGTGAACCGCAC TGTCATTAAAGTCTCTTTGGTagtctttaattttgaaaaaaagtgatttt tttgtaaagATCTAACATTTTTGGACATTTTACCCCGGATTTGaggtatt ttgaaattttctaactTAAAAACTGATAAATTTATTAGTTTAAAGGCTTT TTATTGGGAATTTTAATAGTTTTAGACTGTTTGAGGGGTTAATCGCGAGA CATTAgctcaaaaatttgaattttggtcaaaaaatgagtattttttgcaa tttttaccccctgaaaataaAGAATTAAGCCCCCAGTGGATAGTTAATCC TGATATTATGATGAGAGCAATCACGATCTATCACCACATAACCTTTGAAG TATCATAAACAGTTTTTCGTTTGCGTAGGACCACTTTTCTGCTGAAAAAA TACGATTTTGGGGGTTTTTTTCGTGTTTTACCCCCTGTTTTCTTTGGTAC AGAACCCCCtggtaaatatttttgaattttcttttttcaaaatgttattT TACCTATTTGTAACATATTTGGAAAGTTTCAAGCAATAACGATTTTTAGA TAGTGCAGAATCGCACTTCTAAGTTACCATGGTGTTTCAAGTCTCAAGCA AAATCCCTTACAAATTGGTATTTTGGCTAAAAACACCCCCACTTACCTAG CTTACCATTTTAGTTAGCCCCCTTAACAGCCTATTTACCGTCTCATTCCT GAAAATATAGCATCTTAGCAACCCAAAACCACCATCAAACATTTTTCACC TCTTGGGGGACGCAGACCCCCCAGATCGACCTGGTCTAAGGATAGAAAGT TAGATAGACATTTTACAAATTACGGcacgttttgaaattattgccatgat gattaactcccagcggattttattacaactacttattcttttcataaaaa accaTTTAATGTCTCCAGGGATGtgatcaccatggtaattgtttgaatac gaggcaagtgatgttcgtgacgtaatttatgaaaaggtctattatggaAT TTTTTCGTTTCAGAATCCCTGTATGCAGAATGCATTGTTATGTGAACATG GAAGTATTTGCTCACCGAACCGCTTGACTAAAACATATCAATGTCTCCAT TGTTTCCCTCCATACACTGGCAAACATTGCAATGAAACTGGTAATTATTA TTATTGATATGCGTAAGCCAAGATTACGTCGTTTTTCATATCGAAAACAC TGGAATTTTACCCCTGagtgttacacgttttttttttaagaaaaacgagg ttcagaatgcctaaaaactaagaaacatgctgaggctgagaatgagaaaa taaaattttttaattcgttttttaagAGCTTTGCaaacaaaacaaatgtt ttttatttctttccatgaaaaataggctgtcaatctaatcactgtagaaa gaattcAACAAAGATGAAgggcaaatattaccatattaatgtctagcaga ctgtattaATATACATATTTACTATTGACGAATTCCTCAGAAatctccaa gtgtaattgaaattggtttctttcaaaaaaatcttctacatgattcccaa atgtataacagtaattactaagtTATTTATTATGGTAATGTTACTttaat ggaatcgaaataattGACCAAATCTTTTTGTTACGATTCTTGACTCTTTT TAAAAGGCGttgatgacatttttaagttgtgttttcaatgacgcgaaaaa aataatatcaactttgaacttaatccaagatcttaaatggtcgtcatggt tacttttctctgccttgattgcgcgctgaatagaatccgGATGGTCGGCA CCGGGCGATGTATGATTTCAGCCTGTGCTTTCACAGTAAAGATTGGCTCC actcatttaccttgagtgccacCCCCCCCTCCCCACGGTTTTATCCCGTG GAATCGAAAACTTCGGTTTCTCTGTGTAAATTAATTACAATTTAAGATTT AACCAATGCTGGGCTACATATTACCAtctagtagggggaaatttgttcgt ttttttgaggtcgctcgatttttttagtcaaagcacttgttatacatttt tggaaagctaaggggtaggggaatcaaaataNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgctttga ctaaaaaaatcgagcgattttacaaatttccccctactaatccTTCATTT TAAACATAAAACCTCAAAGGCCAGAAATTTGAAGTTATCTCTTGTGTAGA CTGTAGCAATGCTGGTTTAATTTTCTTGATTATTTTGTCATTTCTTCTCC CTCTCTCTTTGAGGCGGCCGGTCGGGCAAGGGACGCCAAACCGGGTTCTA GACTTTTCAACCTTTCCTTTTCTGCTATACTTAACTATATGGTTAGACTT TGTGCCtatgttttaatttctttcttcttgttaAGCTGACAGGTGACTCT AGAGTGGCAGGAGATGCTTAATCAAGCTAGCGCACCTGATCTCAAACTTC GGTCTTCAGCTTATCACTTCCTTTTGTGTCTTGTGCAttccttttgtttt ttactttttggacctaccccggtggggtggaggtcctataaattaaccca tgttcgttagttagttagtacgttagttaccaacttttctcgagattggc tcatttaatttttctgattttttgcacaaaggtgttactataaaccctcg aatgtgacggagcccgattttcgaaaaaaaaaattttccggccggtagaa ccggaaatgtcccgaaaaaagcggttttttgagattNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatag atatataaatcgaaatttaaaattatacattacttccattaaattctaat tattcgttttataaataggtaggtccattaaagtattacttgttttattt ctttcttcATTGGGTTTTTATTACAGATTGTCATGGTTAGTCGCTAGTTT GTATCTTCTTCAGTGTATATAACTTcactatatttctttttttaaggtCC ATCGATACCCTCGACGATTTCGCAAGGTAAGATAAAAAAGGGTGCGACAA TTTCGTTGCTCCGAGGAAAATAGAGATCTTTCAGGCTTTTGGTGGGTTGT TTAACgaaagaaaatattattattattctagACGTCTATTGGtaaatttt gaactttgaaatctattttttttaaatgcaatGTAAAGATACATCCAGGT TTCCTTGTGAAAAGGGAAGGTCTTTGTGGGGTTTTTATGCATGATCGTTG ATCTTGAAAATGTTATCTTAAATCGTTTTTGGTTGGTTTTATGTTCTATC CAcaacagggtgtccggaaaaaagtatcgagctgaaacacaactatgagt aaaaataatttatgtgtatgttcacaaagttgtattttaaggcttgggga cacgagaagttttttttcacgtttgtgcaatgcaacatgcgggaacatgc tccatcccaccaacacaagaaaaaagtgcttgtcctatggtttctttttt tgttcatgggacaaaaagtgagggaaatacctaaaagacacgctgatttt gtcccaaaAAGaagattcgaatcaattttgctccattgtcccagggacaa gaaagaaagaaaaatggggttgAGACACGaaaaagcgtttcaggttggtg ggatggtgtccccaagcctttaagtTCCCCCTCCTTTTTTGAAGATGTAT ATTTTGTCCAACAAAGGATTTTTAAAAAAGGTTATCGATTAATGCCTTTT AGAAAACAAACTTTTCTATATAATAAGGCTGTGATTTCTCATATTTCGGC GTGGATCATCACAAACTTATCTCcacaataatattttcaaactcGATGCT TTTTTCCAGACAGCATGTACAATCTGGATAACGTTTTTTTACAAactctt tattttcattgtttttaaaagtagaaaaaaactttttcaaaagtcgTTTT TAAACTATTATCCAATTGACAGTGAGCTGATTTCACAAAATTCGTTTACC AAATCAATCATCTATTTTTAAGACATTTTACTTGGTAAAAACGCTTCCTG TATTGCTTTGAAAGAACATTTCAATATACCAAACGGTTTGCAACAATACA CAATACATCCATGGAGAGACCAACGAAAAATTCATATAAAATGTTCAGGT TCGGAAGATAATTACATTTACTTTGAAGGAAGAATATTGTtccaattttt gtaaattttaggTAGACtcgctaattttttttccaaagctATTTCGcgag attttattttatttcaagtaTCATTTCATCAGATAGATATGCAGTTCTTT AAGGAACTAAAAATttgattcgaattacagagagtaatttcaGGAAAACT CGAATGATAAGAATTTGAATTAGAACGAGTTGACTGTATGTCTACACTTT TCTGAAACTTTTAAACTAGctgatatattttctttttctttttaaaatca ggAAAAGTTATGAGATTTACCCGACTAGACACAAGAGACCAAGCTCCAGT GAAGGAACTAAAAGCTGCGTCAATGGAAGATGGTCTTGTGCTTGAGAATA ATTATCGTGCGCATGCGTCCTTTCTACGCATGGCTAAAATACTAATGAAC TTTGAAACCATACGCATGAAATGTGTTCGAAACACAACAGAATTAGTTTC ACTGGGCAACAAAAGACAAGCTTCTGATGCCGATTTCAATGTTATACGAT ATTTCTCAGGAGAAAGTGATAGCCGACCTGTGGAGACGACAAGTATTTGG AGATCCAGGCTGAATGGGGTGTGGGATGATTACCCAATTGATGCAGTCGA CGACCTGTTATCTGCTGACAATGTTGAAAAAGAATATCGACCTTTCAAAG ATATTTATATAGGTAATGATGGTTTAAAAATGACATTCACAAATGAATCA CAACAATGCTTTGGTCCTGAAGGCGATTTTAACCATTATTTACTCGAAGT TTATTGATGAGAAATGGAAAcatatttctgacaaaaaaatGACCTTTCAA AGATATTTATATAGGTAATGATGGTTTAAAAATGACAGTATNCGACAGAA TAATGACCTTTCAAAGATATTTATATAGGTAATGATGatttaaaaatgac attcaCCAATGAATCGCAACAATGTTTTGGTCCTGAAGGCGATTTTAACC ATTATTTACTCGAAGTTTATTGATGAGAAATGGAAACATATTTCTGAAAG AATATCGACCTTTCAAAGATATTTATATAGGTAATGATGGTTTAAAAATG ACAGTATGATACTGGTCCGAACTTCCTATATCTGTAACCGAAAAATGAAT CGATTTTAGACACCGAAGTTTTTGCTTTCGTTTAGGTACTCGGTATCGTA CTTTTGTGAGGGAGATTAataccaatgaagtataagcccgaagggctaga agagAATCTTTGACCtgtctcaggcaagaaaaagtgaagccttaaaatgg gcgctgcatttttgacgacgggTTGAATGTAGCAGTCCTTTTGTTTTcta gtgatattttttttcgaaatttagtggtaaattttagtttcaatcagcca cgtgtgtaaaaaccaggtggCTGGCGcaattttggtaggatttgttggct tcaaatcctaccaaggagattcacTTCTATTTCATTCAATTCATTGGTTA ATAATTTGGGCCATTAATGGATCTTTTTCGGAGGGGGGGTTATTATTTTT AGCTGATCACTGAAATTATTCttcaatttaattatgttttcTAAGACTGT ACATTTTTGTTCTTacatttacaatttttcatctttggAAGAAACTGAGC ATAATTTTAGCCAAAACAACTAAGTAACTATTTTTCCAATTGAATTAAAC TTCAATTAATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000028XLOC_000028Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000052-exon-sc0000001-1491911889:1153534..1153747TCONS_00000052-exon-sc0000001-1491911889:1153534..1153747Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1153534..1153747TCONS_00000052-exon-sc0000001-1510915933:1153534..1153747Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1153534..1153747TCONS_00000052-exon-sc0000001-1575043694:1153534..1153747Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1491911889:1156866..1157330TCONS_00000052-exon-sc0000001-1491911889:1156866..1157330Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1156866..1157330TCONS_00000052-exon-sc0000001-1510915933:1156866..1157330Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1156866..1157330TCONS_00000052-exon-sc0000001-1575043694:1156866..1157330Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1491911889:1163397..1163523TCONS_00000052-exon-sc0000001-1491911889:1163397..1163523Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1163397..1163523TCONS_00000052-exon-sc0000001-1510915933:1163397..1163523Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1163397..1163523TCONS_00000052-exon-sc0000001-1575043694:1163397..1163523Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1491911889:1168030..1168059TCONS_00000052-exon-sc0000001-1491911889:1168030..1168059Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1168030..1168059TCONS_00000052-exon-sc0000001-1510915933:1168030..1168059Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1168030..1168059TCONS_00000052-exon-sc0000001-1575043694:1168030..1168059Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1491911889:1169056..1169181TCONS_00000052-exon-sc0000001-1491911889:1169056..1169181Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1169056..1169181TCONS_00000052-exon-sc0000001-1510915933:1169056..1169181Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1169056..1169181TCONS_00000052-exon-sc0000001-1575043694:1169056..1169181Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1491911889:1169485..1170895TCONS_00000052-exon-sc0000001-1491911889:1169485..1170895Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1510915933:1169485..1170895TCONS_00000052-exon-sc0000001-1510915933:1169485..1170895Clytia hemisphaericaexon
TCONS_00000052-exon-sc0000001-1575043694:1169485..1170895TCONS_00000052-exon-sc0000001-1575043694:1169485..1170895Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1153534..1170895 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.0111106 0 0 0 0 0 0.0953281 0 0 0 0 0 0.172738 0.328118 0.16396 4.11545e-09 0 0.000335592 0 0 0.881059 0.337814 0 0.70771 0.209233 5.82823e-10 0.37801
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000052 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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Spatial Expression
in the tripal_feature_cv_term.tpl.php