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TCONS_00000035 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000035
Unique NameTCONS_00000035
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length727

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000035 ID=TCONS_00000035|Name=TCONS_00000035|organism=Clytia hemisphaerica|type=transcript|length=727bp
CAAAGGACCAACTTGAAAGAGAAGGCGGAACAACAAAATGTCAAAACGAA
CACAAATCACATCAAATAGTACAAAGGACAGCGATTTCTCGACAGTCCAT
TTTGACAATGCAATGCATGTTTTAATCACCAAAGAAATCAAACAGGATGT
TCTCCCTAATGAAGAAATTCAAGTACCAGAATGGGAATTACCACCAGTCG
ATAACGAAGGCGAACAAGTTGGTGAGAGTATCCGCGAGAAAGAAGAGAAA
TGGACAGACCTGAGCACAAAACATGTTCGATAGATGGAAAACAACAAGGG
TAATGCCGATAACACCTACGGCCTAAGTTTATTCTTTAAACAGGAAGTAG
GCTTCAAGGCTATTCATTGTACTATAATACGGATACTTGATAATACGGAA
GGGACCACCAGCCAGTATGAGATACGACCGGATTACATCGGAgctgaaaa
aatcgaaaaaaatatctcaATGGAATTCATTTCAACAAATTATTTAAACA
TGGGACATGATTACACACTAGACTGTATGCTCAATGTCAATTGGTGTAGC
CTGGATGTCAATGATGGTCAGGCTAAAGTACGGTCTGGTGATTTCAAATC
GACGGAATGGACAAGTGTTTCTGGAAGGTCGAGAACAGGCAAATGGCTAA
ATTACAAACTCAAGATTAACATGGAAGATATTGCTTAATGGTTCACTTGA
TTACATCTGTCAAAACTCACACAATGA
Run BLAST on NCBI

protein sequence of TCONS_00000035-protein

>TCONS_00000035-protein ID=TCONS_00000035-protein|Name=TCONS_00000035-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp
MENNKGNADNTYGLSLFFKQEVGFKAIHCTIIRILDNTEGTTSQYEIRPD
YIGAEKIEKNISMEFISTNYLNMGHDYTLDCMLNVNWCSLDVNDGQAKVR
SGDFKSTEWTSVSGRSRTGKWLNYKLKINMEDIA
Run BLAST on NCBI

transcript from alignment at sc0000001:937598..953993+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000035 ID=TCONS_00000035|Name=TCONS_00000035|organism=Clytia hemisphaerica|type=transcript|length=16396bp|location=Sequence derived from alignment at sc0000001:937598..953993+ (Clytia hemisphaerica)
CAAAGGACCAACTTGAAAGAGAAGGCGGAACAACAAAATGTCAAAACGAA CACAAATCACATCAAATAGTACAAAGGTAAAGTTTTCTAAGCATCAGTCG AACATCTAGCCAgtgccttcccacaaaccaaatttttactTGTTAAAACG CGATAAAAAAATCGGTTTTTGTCTAACAGGACATCGATCATCCTGCTCGA CaccaaatatttaaaaaattcaacctCGACAGTAAATTTATTCTTCGTTG AAGCATCCTTTAACTATAGAcggattgaaatatttttgatggtTAGAAAT ATCCAAGCGCAATGTTCTAACCTCTTTGATGGTCGAAAATATCTTTTACG CTCCGCGGAACATAGTTTTGATGACATTTTGTGAATCCTGGGGAATTCGT CTTCCATAGACCCTGTAGAgtcaaaattaagaaaatattaGGCCAATATT TTGCTTCGTGTACACTGTTTTTAAGAACGTTACGTTCAAGCGTGCATGCG CGCTTGCGtgcatatttttaaattttagccCCTTAACCATAAATGTTCAC ATACCCTGTTATGaaataaaaacgtgtactaTCTACCATTTTTATCTTTC TAGGACAGCGATTTCTCGACAGTCCATTTTGACAATGCAATGCATGTTTT AATCACCAAAGAAATCAAACAGGATGTTCTCCCTAATGAAGGTACTTAAT AGACCTGAATAGGGTGAAAAAGATAAACTGTTTCGGCAATCTATGATTTG TATGAAAAATGGCGCTGCTTGCATATAAAATGACATCAatggcgaaaagg tctattgaattcTGATTTTGTTCAGCTTTTTCAGCTAAACAGGCTTTTAA GACAAAAAACAAGGACAAAATTTTGAAGGGTCCACTCTTCGTTCTCATGT GGCACTTACCCGCTGGTCGTTGAGGTTGATTCCCCTGGATTttgcttttt aaatgtttatactttttacttttcaatCATTAGAAATTCAAGTACCAGAA TGGGAATTACCACCAGTCGATAACGAAGGTGATGATTTGTTAACTTTTTA CAAAGTccatagcgagattatgtatcggagatattctacggctacggttg aagTGGTGAGGGTAATGGCGAGtgaggcaagtaatggcgggtgaaagcaa gttcgatatttgacgtacggcattatgtcgacttgcttctacggtgtttt ggtgtttttcccgtacaaagcaaagtagacaacgacacgACCCGTAcggg cagccccgcaaccgtagccgtagaatatctccgatacataatctcgctca TGTTACGTTCTTAACGTCCATTAGAACAACATTGTGTGTCAAATGTGTGT AGATAACTATCAAGAGgaaaaatttcttgatattccaatgcaaaaaaatc caaaaatttacaAGGGGGAGAGTCGCTTATTACGCACTTGAGATTGAGAG ATCTGAGCGTTTTTTGAGAAACTTTAATCCTACGGCTGGCAAGGTTCAGA TTTTCTAGGGGGTTTGGGTTCGATGAAAAAAAGCTCATGTAACCGTGACA ATTTTGAGTACTGATTGAGGGTGTGAAATAGTGCTAAGGATTTTTCGTAA TCATTTGCAAATTTCGGTGAGCCTTAACAAAATATTATTTGTACCATGCC TGTTTGTTTGTCCCAAAAATTTCGGGTCAGCCTGGACACTTtagaaattt ggcacacttattCCTTGGGTGTATACCTGTGAGCgttttttttgtctttg tttttgGAGTTGGAGGCCTAGAACAATTTTCCCACTATTCCTCGATTGGA CCCGGGAAGGGGACCTTGAATAGtcgagcccagtgcggtgcgcgCGTTCC ACTTTTTGGAAGTTTCGTTGTTtttactaccttatcggcccttttttata taaaacttattggcgttatttttaggctcgtggcgtaataaggaccGGTG TTAagagggccggcgtaaaaagggccaaaattttgcaatttttacctaaa agcggcgttaatttttaaccattttttctcaatggATTTTAGGCACGATT AAAGGATGTAAACTATTCATTTTTGTTACTATATATCCAAAACtcaaaaa tcaatgattttctatgcaattttcaacagtttaataataaaagatgatat ttttacgtaaattttagttaatactCCCTGTTTTTAAACCTGAGTagcga tttttacaagttttggcgttatttacggctTATTGGCGTAATCCctaaat taggctgtggcggaataagggctggcgtaaagagggccgataaggtattt gaaTATGAATTTAAGGTAAACAAACTTCGTtatctttttcattcattttt atttcgttGATGTCAATAGGCGAACAAGTTGGTGAGAGTATCCGCGAGAA AGAAGAGAAATGGACAGACCTGAGCACAAAACATGTTCGATAGATGGAAA ACAACAAGGGTAAGCTACTGTTATACTCACCTTTTCTTGAATCTATATAT TCTTCGTGACTTCAGTTGCTCtattttcgaatcttttttgTCCCTTCTCA TACGGCCGTAGGCTgtacgcatcccctctgatatgttttgatatagggaa tgctaatcgtgtatgaaattcccGTTCGAGAGTTAcccaaaatttgtttt aatccatgggattttttcattcaaattcaatgaaattttatcTCTAATAT AAACACTTTAACTAATcaagctaatcaagtttctaaaaataaaaaactct cgAACGGgaatcccctatatcaaatcagCCTAATATTGCCGCTCAACCAA ACGATCGACATAGCCAAAACATaatgagattttagtgtattctaacgttt ttcagaatttaaagttcgggcgagaatagATATtgtagcacttccacttt ctttcattgaatatttcgattttggatgggttcagtggcttctaggctat attccaagccttattggagcaaatttgagctttgaAATCCTGAGATACTA AGGTCGTAACTcataagtctcatgttaaaaactcagagttaaaactctac tttccaactgtagtttaacgcgcttaaaatcatttgtggtgtttaaattT TCACCGGGAAATaccctttgtctcaaatgttttgtccatgattgtagata aATTATCAATATTTCGAGGGAGCCAAATATATTGTCCATCATTTCAGTTA GATATGGTCCCTTTCAAAACAACAGACATGAGGAATGTTTAAAATTGTGG AAAGATTTTCAGGCTCTTTGTTTGTCTCCACAATAGGGTCTTCctggaaa aaattgaatatggggggatggaggatataaaATTTACCCCCAATGTTGAG GATAttggtttttcgaagtatcgaaccccctggatatcctctcttataaa gatgctttcccctggatatcgtattttttacacttgaaaagacactttac cccctggatatccacttttgaaaaaaaattaataaccccctggatatccg atatcctcaacaggggcacggactatttctggaaaagcctaatATGGGct atatttttttggaaatttacctccggacattgtgacttttgacagcaggt gtaaccccccccccttggacaagcatcagtttaccccctggacattcaaa attaccctcaaacagagcaaagttacccaaaaatagagcaagtttacccc ctggaaaaagcaaattttgtagatttttcactattcTCCGGACACTTTAT CCTCCATCCCCCATTCACGGTAAAAGCACCAAAATAACGCCATCTGTTTC CCCCAtttacggacattttctggaaaagcccaattattGATAGCTTTTCT TGGCTCTGATTTCATTTGGTGTACCATTTAGTACAATTATTTTAAATATA ACCAAAAATATATTACATTTCTTAAATCATAGTACATTATAAGTTAAATC CGAAATTATgcaaataaattcatttattatgttacaaaataaaattaata ttAAAAAGGAGTTTTTTGGGCTTTCGAAACCAGAATATTTGCCAAAAACg ttactttttttgtttttgtttgctaaaacctctaagaaaatgaaagaaat tagttGAAAAAGGTACCGATTCGCGAAAACGAGAATTTTACTTCGAACTT TCTTTTGATGTTGATGGCAGCTTACCACAAATTAAGGCAAACCGTAGAgg caaatttccaaaatttcgatTTGTTCACCCCTTTCGAAACTTGTAGACTT TCCTTAATTCGAACTGCTATACTTATtcccagtccccgtcaaggagaaac ccatATCAAATGCTTTCTAaagttcgaatctttctgttaGTGATTGTCAA CTGTGTTTGTTTGGTGGTGGAATCAAAATTTTAgttcaatttcctttttt ttttggctgaaaaaaaggaaatagcACCAAAATTGTTGATTGGAGTTATG TAACTGCTTCGGGTAAGCCGCTTTATTCTTTGTGTTGTCTTAACCGCATT GCTTTATGGGTATCTGTGGGTTTTGTTTCCAGGTCGCTCATCAACGTCTG AtcaatcttcattttctcttctaacattttacagaccagattgtCTTGTT CAGTTTTCATGTCCACAAGTCGTTCAGACATCGAATCTAATTGACTTTCC ATTTTACGGACTTCGGCTTCTAATTTGGTTGCGCGCGTTTCCGTTTCGGC ATGCTTTTCCCTTAGCGTGCGGATTTTTTCTTTCTGCGCATGCTCTCGTT CCTTTATATCTTCCTGTAACTTCAACATATTTTGCAGACGTTTCGTAACA TCCGCGTGCTCGCGCTCCAAACATTTAGTCCGCTCCTCTTCCGCATCGCA CAGTTGCTCCTCATGACGTAATGCTTTTTCGGCTTCCGTAATTTCAGCTG CAGTTTCGCTAGCCTTTGATTTCAAAGACTTGTTGGAAATCAGTAAATCA CCATATTCTTCTTTCAGTTGTTTAGCCTTGAAATTCTCGTGGATATCATT GACCTCAGTACGCTCCTTGAACTCATCAATACAATCAGCTTCGATTTGTT GTTGTCGAACTTTCTCGCGTAATCGTTCGTTGTCGAGCTCTTTTTCACGT AATGTTTCTTCCAATGCTTGTAGCTTTGCGTGCAACTCTAAAACGATCTT CTCTTCCTTCTCTGTTTCCGTGTCTGTCACCTTGGATCGGAGGGAAAGAT AAAAAGATTTAATCTTTAGAAAGAGTTATACTCAATAATTTGTAGCAAGC TTAAGACGCCCTGCAGATAGGCGTGTAATTACATCTTTATTTTGTCTTCA TTTCCGATGAACAACCAGAGGTATCTTCTGGAAGATggttaaaaaataac aataacactttttttataagaatggtgtttttccaattcatcatgaatgt tctttaatttttgagaaaaaatcatcctgaaatattcttaaggtATTCTT AGATTTGGATCTAAACCCAGCAAAAATCTAGTATGTAATACATACTTCAA GCGAAGATTTGACATTTTTGTGGAACCTTTTAGCATTCCTGGGGATTAAT TGGCAATTTGATGGTAAAATACTCTATAAAACTGActtttcttaggttca gttACCAAATTCCATGACGGtggatattcttaccatattctcaATTtgtt ggccaatttcatcataaatattcttataaagtatattcttattaaaaaag cgtgtatatgaCAATCAGCTATCATACCAAGTTTTATGAGCAAGTTTAAG AAGTCTGTCATGAATTAATTCTTAGAAGATGACGTCATACCTGTATTTTT CCTTTTAACTCGTCTTCTTTTTTGTGGGCAGTCTCGATTTGATCTAGTAG TGTGTTGATTTTCACTTTCAATACGTTCTCCATATCCTCACGTTTCGCAC ACATCTGAAAATGATAATATATATATCCTTTTTCATCTTGTGTTTCTCTG CACAATTAAGAGTGCTCAATACTTGAGTAGAGCTTGTTACAATGTAGAGC AATTTAGAGCTTGCTACATAAAGATAAAAGAAGGATATTTCTATATCCTT TTTCATATGgatacaatttttttatataaggacgTCCACaattgaagcct tcggatgattttaactttttaagtttcaaGTCTGAAAATGTTCctaattt catcattttgtaagtatttttgggCAATCTTTTAAGAAATTTGATGCTTT CGAGTccataaaaccttaaaatgttcttaacttgttcttgtaTATAAATT GTTCTACTAAAAAACGGTtacctttttaagaaaatgactCAAAACTTTGG CAAAACCTAACAACTACAATTCGAGCCTGCTCTTAAGAAAGTACAATTTC GAAGCCTCTATTTCAAGTTGAGGCTCAgccaatacacctttcccgaattg ttaGGTTTTTTTCGAAGGTCTTCAAACcatattgaaaactatatatttgT ATTCCTCCTATAATGACAAGTGCatgctgaaaatttgagctcaaaagctt ttttctatcaatttttatgactgtttttgtTCAAGGTGAAATCCCttata aaaactaaaacatACAGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt gtaattctattgtttataaagaaatttcaaatcaaaataactcaaGAACC GGAAGTGCTTTTNNNNNNNNNNNNNNNNAATcaaaataactcaagaactg gaagtgcttttttcataattctttttttatttgtttagttttgcgacata caattttatgaaactaaatagaaacattcaaacattaaaacaaaaaagtc caaaagcctaaataacaattcgggaaaggtgtataaTCAACTGATTAAAA AGTTCTTATAGGTTTcatttttaagtcaattttttgTCTCTAAATTTCta ggttttgttttcaaatttaattcgCTATGTATGCCTTTTTAGAATGATTT CAGATCAGGTCAACTGGATTTCTAAAGGATAGAGCATTCATATAACCCTA ATCTTTATAGCTTTATCCCAAATTACCATAGCATTGAGAAAACAAGATAA TACCTTTTTTGCgatttgaaatttccaaaaaacgcaacccttttcttgaa tttcagccTTGGTTTAAAATCTCAGCTTTATTCCACGGCCGaaggtaaaa agaaaatttcgtcTTATTTTTCCTCTGCTTCTCAtactcattatttttta tttttgttcatcttttCGTTTTAATCTTCctaattttgaataatttataa tttttcattatttctctcctctttcttttatatGCTTCTTCAGTTCTTCC TTGATAATTTTTTCCACTATTTTATTCatcatttcttttgttgtttttat cgaCTTTTAATCAATACGAGAATAGTGCTTTTCTCTCTCTTTCTTAGTGA AAAATCTCTCGCTTCTCGTTAAGCAGGCTCATTGGCTTATTGCAGTTACC GTATTTCTTCGAATAAACCCCTTTCTTTTAAACAACCCcgctcgaataaa cgcccttaCCTAAAggaaacattttcaataaaCGCCTCCTCAACGCCGCC TCTCTCTCTTTCTTAGTGAAAAATCTCTCACTTCTCGTTAAGCAGGCTCA TTGGCTTATTGCAGTTACTATATTTCTTCGAATAaacccccttcttttaa acaccccctcgaataaacgcccctccctaAAGGAAACATTTTCTATATAC GCTCCCTCTCTCTCTTTCTTGGTGAAAAATCTCTCACTTCTCGTTAAGCA GGCTCATTGGCTTATTGCAGTTACCGTATTTCTTCGAATAAACCCCTTTC TTTTAAACAACctccctcaaataaacgcccttACCTAAAggaaacatttt caataaaCGCCTCCTCAATGCCGCCTCTCTCTCTTTCTTAGTGAAAAATC TCTCACTTCTCGTTGAGCAGGCTCATTGGCTTATTGCAGTTACCGTGTTT CTTCGAATAAACCCCTTCTTTTACACacccccctcgaataaacgtccctc cctaaaggaaacattttcaataaaCGCTCTCTCTTTCTTGGTGAAAAATA TCTCACTTCTCGTTAAGCAGGCTCATTGGCTTATTACagttaccgtatta cttcgaataaacccCCTTATTTTAAACacccccctcgaataaacacccct ccctaaaggaaacattttcaataaacgccccttcgaataattatttgaaa caagtagctGTAAGGTAGAAATATGCGGAGGAAATTCTAGGTGATATGTT GATAATAGCACTTTTCAGTATTCAAACTCGTTTTGACCCACTTTTATCTT TGAAATGACATATTTGTAGTACTGAAGACATAAACACCCCTtctaaaccc ccccccccccaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNattgttgtttattgattttttttctcacaaaataa atttcgaatgcaattaaaacgttcgatgcaaaaaaaatgtaaaaaaaaca ttaaaatcaattttgtaaacattggtgccgcattggagagtgtgattgac gattaattgctctctacaggatgcaattaacgattgaTTGCtatctttga gggcgtgccgaataagaaaaaataacccatcgtgcgattatggCTGTAAT GGCATGTATATTTGTCATCACCAGTTGTTAGCTGCCAGCACACGTGTCAA ATATACCGGacttaaaaaccttttttgataACTTGAAAGTATGATTGTAA AGTTTTCAAGGTAAATTCTGAGGGGACCACAGGATCTGTTCGAATTAGGT GAGTTTTCGAATTATAGGAGTTCAACTGTACACTGGACATCGACACGGAA AGGGTtaactcgggtaagttatggcatgtctcaaaaacctgaaaattacc ataatttttgaaggccattagccggcagaaaatggggaaaccaatgattt gctaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTACGCCcttatttt tgcgaaaaaccgcaaaaaccaaaaagtgctgacgtcagcaaaacttgttt tttaaatatctccagtttggctaatggtagaaacatgaaatttggaccaa cgttgaatattattaaaaggatcattttataaaaaaaaacttttcgaaat tttgctttcgtcagcagaaatcaacaaaatacgaaattttgcaataaagt gctgatgtcatcaaaatttcaaattcttccTGGAGATGGTGCTTATTCAA TGGGgacgcttattcgagcggggtgcttataatattatttaactaaaagg ggggcgcttattcgagcggggcgcttattcgaggatttacgggagaaaat gcccattttaagcctgaaattcaCGAGCCTTAGCCAAAATTTGCTGGGAT GCTGATTGAACCTAACTAATGTTTAAACTTGGAGCAAGAAGAGAAGTGTA ATATAGTCGAGTGCTGGAACGCCAAGGGGATAATCAGTAATCGTCCGAGT TACGGAAATTCAAGTTATAGAGAGGCAGAATAGCCTAAGAATCTTCTCGA CGGACCAGAAAAATCGTTGAGTTTATGAAGATAATCGAGTtgaagaggtt cgagttatggaaagtcGACTGTAGTCGACAAAGAACGGCGTGAGCGAACG GTTTCCTTGTGATCTTTGGCtcttccggcgatttttagaaagttccctct acaaaatcagtttcattgaaaattgaaccatgcttaatcgtggacatttt cttataaataatctttttgttttgaaaaagcaaagattcaaaaattcaat gaaaatctgcaaaaaggcggtttccggcatatttccgttATTTTCGACCG GGAAAAAAAATTCCTTGAAAATCGGACTATTTTagacattgctaatacgc atcctaatgaaactaatgatgaaatctcgagaaaatgccaaaaaaacggt tttccgaaaaattgcaaaaatttgcttaagccatcttttacctatgatgg taacCTACtttgatgcaaaaaatcagaaaacattAATGAtgcaatatttc acaaagtccaaaaaaaccgtttttagTCGttgagctgaaaatttttttgc aaaaatctgtttgCGCCATCTTTTACTTACGATGATACctaccctacttt cgtgcaaaaaatcagaaaaaactaatgatctaatttttcacaaagtaggc gttttttgaatatttgtgtttggacatgaaattttggttgctagaCGAGT TCATATAGAAAAagtggccaaattcgatattttttttataagcttaTTAC CAATTACttagttattagcttttctcgagattggctctttcattctttat gattttttgcacaaagatgcataactataaaccctcgaatgtgacggagc tcgattttcggaaaaaaaaatatgcGTAGATTTCAGCCGAAAAACGGCTC AAAAagggactttgtgaaatattggatcattgtttttttctgattttttg catgaaagtaggtaaaagataacctgagatcagattgtggtcgttttctg cccaccacgctgaagctctaaagggatgggtgaaaacatacaatctgacg aatatgcaatctcgaaatcgtaaggaccgcgttcgtcttaaaggactggg gatgacaacaaagttacgtgattgtgtttatgaatagggtgccgtatcag tttttgactttatggcgcacaacaagattcttgttgtagaattttccgcg ggaggactattttcctcagatgtataattttcaagcgcctttagaggttt accgtgcgcgtaagaaaattatcaacatctgttatcaggttagtaaaaga tggctcgagcagatttcggctcaaaaaacgcatctttatctataggAATC ACAAtcacatggaattattatagacactggaaaaacaacgggctgatttt tgccaatttctcatgtgcaagccttgtccgcagtaatgacattattgttc accctcctaccaccattaaatgatttttcgtagcatttttaattgcattt ctcatcaaaatacacttatccaattcccaaatgagactttaagttctcct cagagattcaaactcatctagttaattactaattatacgtcgttatgacg ttttaaatttcgagaATGATGCAAAAACAtactatgtataagaaattgaa tattgacaccagaaatttttaaacttcaacctccaaaaatccaccgtgcc accacgtgccaccaaaagattttcataccacagtggagctatgagactca cgtctaatataTGTCAGTCTCAGCTCTTCTCCgagaaatattggaaagat aatcccaattcaaaatttcgtgtcattataagcattttgtctgattttac tcgtctgatgattttctcacaccagatttcataaatgtgttcgcttggta ttctagtatttattttcaaacttttagccagcaaaagtgcgatcagaaaa agttagagaactttttagaaataagagtattaatcatttttcaaaatcag agtccttcgagccgccatgacagttgtcctttgcggacaaagcttgtaca ttgattgttttctgaaacaatagaaaaacaatacttcgctctccaccgtt tcattcgatgtttatccagagtctctataataaatccatNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgct attaataagcatacatcaatgttattagccaaattactcaattttttgat gagatagatgttttttttgctcacgaagtcttgaatatgaaagaatattg tgtttgagcatgaaattttggtttctgaacgtgttttttataagaaacaa acgacgaatctttatataccttaagggaacttattttggtgggaactaat tttgacgagtgGCAAAAATCttgaacatttttaattttggcgagaactta ttttggcaaatgattcttttttttaattttggcgggaactagtTTTGGCG AATGGCAGCTTAaatatgttctattttgccttatttgaagctttttttgt gaactcaagaagttatttaggctaattttggcgagaacttattttggcaa gtgagcaaaataattaattttggcgggaactaattttggcgaattttgtc taaGTTCGCCGAATTCGCCAAAANGGTTATTTTGGAAGTCATGATAAAAT TGGCGAGGAATCTATTTTGATCAGGAagcaatttctttcattttggcATG AATGAATTTAGTGATTTATGGACAAGATTCGCtgaattcgccaaaattag ttcccgccaaaataagttcccttaaggtatcgtcactatttgtgttctga atgattgtttagtgtagatatcaattatatatgtcttaaatcaggtaggt ccataaaagtatcgcttgttttttttaatcCGACTcggtcacattttggg cattgttaatacgcatctttgtgcaaaaaatcggaaaaagctaatgatga aatctcgagaaaattccaaaaaacgAGTTTTTTCCGGaattcgaaaatcg ggctccgtcatattttgggtattgccaaaaatcagaaaaactaatgagcc aatcccgagaaaagctagtatgtaacagacgaacgaagccaattaattga taaaaaaattaaaagtaagTTTCTTAACCAGActgtttttgttgcaaaaa gaAGTGACCCTTAAAAAGTGGTAGACCTTTTATAAATTGCCATACCAAGT AGCATCATATTTCAACCCCTTATGACGTTGTTGTTCTATTGCGTAAAATT TTGTATGCTTTTTTCGCATGTTCAGAAGTGTTCTTGCGTGAGGTATTGTA CGGATTTTTCTGTAAACGAAAGCTTTTTCCATTTATTGTCGGAGAGTTTT AGTCAGTGTTTGGAtcatcatgaattttcaatttttgatgctGCTTGGTA TCTTTGGTTTTCAATGTAAGTTCATTTAACACGCTTTTTATACAAATAGA TACacatttttaatttataagcAGTCGAGTTGCTAAGGGTCCAGCCCAAC CTcgatccctgcgtattatcagctttttgattcttactgatagcgctaga taataccctggcattggctggttttcgaacgcgaaagattacgtaattca aaaacaaaacgtcagatttcattcgcTCTTCTTTTTTGAGATCGttgcat tgcagtgtaactttgtaacgtcagaatatttcatgacgtattgttttgag aagttccccctctcagagggggaactctcgcatcagccaacaccagggta ttctctggcgtcaatcagtaacgtaaataaagcctgggatacacggggac gaggttgggtcCAGCcctgaaaatggccaaaaaattaagcaaCTTCGCCT TAGCAGCCTAGCCCTGAAACTGAGCATGAACCGGTAAAGCAACCGAATAT ACCTTAAAAAGAGACATTTCCGGCATTATTTGGCATTAAAATGTGTACCG ATGGTATTCGAATACTATACTAGAcataaaatgagataaaaagccaaaat ctttgaagttgCTAGGCATTTTTGACTCAAAATCCATAAGCAACTTATTG GCCGAAATCCAGAAAATCCTTAGCAACTCCAGCCCTGAGTCGAAAATTGG GGTTGCTTCATGGCGTTCTAAAAAAAAGTATATTACAGTCAACtcactct aattcgaacctctattattcaaatctttctgtaattcgaactattGGAAG CTGGAATGTGGTTTTAAATTATAttctaaattaaattaaaaaagaccttt aaagtttgaaccttTCTTTAGTTAAATTTGGATCGGCcttttaaaaagtt ataaaagaAAATACGAAAAAGATTGTGTTCCAAAAAACCTCACGATTAGG TTGAAAAAATTAATCATTATAAAATATCTTTTCTCCTCTCTCCATGTTTA GGTAATGCCGATAACACCTACGGCCTAAGTTTATTCTTTAAACAGGAAGT AGGCTTCAAGGCTATTCATTGTACTATAATACGGATACTTGATAATACGG AAGGGACCACCAGCCAGTATGAGATACGACCGGATTACATCGGAgctgaa aaaatcgaaaaaaatatctcaATGGAATTCATTTCAACAAATTATTTAAA CATGGGACATGATTACACACTAGACTGTATGCTCAATGTCAATTGGTGTA GCCTGGATGTCAATGATGGTCAGGCTAAAGTACGGTCTGGTGATTTCAAA TCGACGGAATGGACAAGTGTTTCTGGAAGGTCGAGAACAGGCAAATGGCT AAATTACAAACTCAAGATNAACTGAATGGACAAGTGTTTCTGGGAGGTCG AGAACAGGCAAATGGCTAAATTACAAACTCAAGATTAACATGGAAGATAT TGCTTAATGGTTCACTTGATTACATCTGTCAAAACTCACACAATGA

Coding sequence (CDS) from alignment at sc0000001:937598..953993+

>TCONS_00000035 ID=TCONS_00000035|Name=TCONS_00000035|organism=Clytia hemisphaerica|type=CDS|length=1215bp|location=Sequence derived from alignment at sc0000001:937598..953993+ (Clytia hemisphaerica)
ATGGAAAACAACAAGGGTAATGCCGATAACACCTACGGCCTAAGTTTATT
CTTTAAACAGGAAGTAGGCTTCAAGGCTATTCATTGTACTATAATACGGA
TACTTGATAATACGGAAGGGACCACCAGCCAGTATGAGATACGACCGGAT
TACATCGGAgctgaaaaaatcgaaaaaaatatctcaATGGAATTCATTTC
AACAAATTATTTAAACATGGGACATGATTACACACTAGACTGTATGCTCA
ATGTCAATTGGTGTAGCCTGGATGTCAATGATGGTCAGGCTAAAGTACGG
TCTGGTGATTTCAAATCGACGGAATGGACAAGTGTTTCTGGAAGGTCGAG
AACAGGCAAATGGCTAAATTACAAACTCAAGATTAACATGGAAGATATTG
CTTAAATGGAAAACAACAAGGGTAATGCCGATAACACCTACGGCCTAAGT
TTATTCTTTAAACAGGAAGTAGGCTTCAAGGCTATTCATTGTACTATAAT
ACGGATACTTGATAATACGGAAGGGACCACCAGCCAGTATGAGATACGAC
CGGATTACATCGGAgctgaaaaaatcgaaaaaaatatctcaATGGAATTC
ATTTCAACAAATTATTTAAACATGGGACATGATTACACACTAGACTGTAT
GCTCAATGTCAATTGGTGTAGCCTGGATGTCAATGATGGTCAGGCTAAAG
TACGGTCTGGTGATTTCAAATCGACGGAATGGACAAGTGTTTCTGGAAGG
TCGAGAACAGGCAAATGGCTAAATTACAAACTCAAGATTAACATGGAAGA
TATTGCTTAAATGGAAAACAACAAGGGTAATGCCGATAACACCTACGGCC
TAAGTTTATTCTTTAAACAGGAAGTAGGCTTCAAGGCTATTCATTGTACT
ATAATACGGATACTTGATAATACGGAAGGGACCACCAGCCAGTATGAGAT
ACGACCGGATTACATCGGAgctgaaaaaatcgaaaaaaatatctcaATGG
AATTCATTTCAACAAATTATTTAAACATGGGACATGATTACACACTAGAC
TGTATGCTCAATGTCAATTGGTGTAGCCTGGATGTCAATGATGGTCAGGC
TAAAGTACGGTCTGGTGATTTCAAATCGACGGAATGGACAAGTGTTTCTG
GAAGGTCGAGAACAGGCAAATGGCTAAATTACAAACTCAAGATTAACATG
GAAGATATTGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000023XLOC_000023Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000035-proteinTCONS_00000035-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000035-exon-sc0000001-1491911889:937598..937673TCONS_00000035-exon-sc0000001-1491911889:937598..937673Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:937598..937673TCONS_00000035-exon-sc0000001-1510915933:937598..937673Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:937598..937673TCONS_00000035-exon-sc0000001-1575043694:937598..937673Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1491911889:938201..938288TCONS_00000035-exon-sc0000001-1491911889:938201..938288Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:938201..938288TCONS_00000035-exon-sc0000001-1510915933:938201..938288Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:938201..938288TCONS_00000035-exon-sc0000001-1575043694:938201..938288Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1491911889:938581..938625TCONS_00000035-exon-sc0000001-1491911889:938581..938625Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:938581..938625TCONS_00000035-exon-sc0000001-1510915933:938581..938625Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:938581..938625TCONS_00000035-exon-sc0000001-1575043694:938581..938625Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1491911889:939967..940056TCONS_00000035-exon-sc0000001-1491911889:939967..940056Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:939967..940056TCONS_00000035-exon-sc0000001-1510915933:939967..940056Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:939967..940056TCONS_00000035-exon-sc0000001-1575043694:939967..940056Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1491911889:953499..953826TCONS_00000035-exon-sc0000001-1491911889:953499..953826Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:953499..953826TCONS_00000035-exon-sc0000001-1510915933:953499..953826Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:953499..953826TCONS_00000035-exon-sc0000001-1575043694:953499..953826Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1491911889:953894..953993TCONS_00000035-exon-sc0000001-1491911889:953894..953993Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1510915933:953894..953993TCONS_00000035-exon-sc0000001-1510915933:953894..953993Clytia hemisphaericaexon
TCONS_00000035-exon-sc0000001-1575043694:953894..953993TCONS_00000035-exon-sc0000001-1575043694:953894..953993Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:937598..953993 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.57527 1.00183 2.55907 2.80713 18.4014 15.5675 15.3215 15.7452 13.8516 11.7958 14.2942 11.4491 7.96726 10.4543 11.0467 11.5485 23.7778 16.2801 6.47975 7.69483 9.67703 9.88372 4.60159 4.90103 15.001 15.2286 8.17045 5.31201 4.38834 2.03547
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000035 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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