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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000010 ID=TCONS_00000010|Name=TCONS_00000010|organism=Clytia hemisphaerica|type=transcript|length=755bp
TTGGCAACTAAATCTCTGTATATGGTGGCGAGTAGAAGTTTTTCTTGGCA
TGTAAGGAAAATCATTCTTTTAGTGTGTGTATGAAGTGTAATTGATTTGA
CTCTACTGATTtgatttgacaaatttttttaaagaagtagCAAATTTGAC
AACACAAAATgaactttttgaaattagttGTAACACTTTTGGCAACCATT
GCGTTGATCAATGAAAGTGAAGCAATGCCACCGCCACCACCGCCGCCATC
TAATCAACAACAATCTCAGCAACAACAAGAACAAACCCAACAACAGCAAG
AACAAACTCAAGAACAGCAGCAACAAACACAACAACAATCATCAGATCAA
CAGTTAGTTCAACCAGCGCAAATCTCACAAGTTACAAGCGAAGAAGCACC
GGAATGCCCAATGGAGCAATTACCATGTACAATATGTTCAGAAGGACTAA
AAACAAAATGTGGTTGTAAACCAGGTTGTGGCGAATGCACATCGATACCA
GGCTGGAATTATAGCTTCTGCTCGAATAAAGTCGAAGGACGCCCGTTAGA
TTAGAAACAAGTTTGAAGGAGGCTCAACGAAAGCTAACAACTGTCATATA
ACCCTAGATAAATTTGTTGTTAAATGAGGATTTGAATGATTTTGTAGAGA
ATATAGCTTATATTTGATGTACTTGttactgtacacgttttttattagaa
catccaccatctttgaagacttcagatgttcttaacttttttagtactaa
gccca Run BLAST on NCBI transcript from alignment at sc0000001:314485..317171+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000010 ID=TCONS_00000010|Name=TCONS_00000010|organism=Clytia hemisphaerica|type=transcript|length=2687bp|location=Sequence derived from alignment at sc0000001:314485..317171+ (Clytia hemisphaerica)
TTGGCAACTAAATCTCTGTATATGGTGGCGAGTAGAAGTTTTTCTTGGCA
TGTAAGGAAAATCATTCTTTTAGTGTGTGTATGAAGTGTAATTGATTTGA
CTCTACTGATTtgatttgacaaatttttttaaagaagtagCAAATTTGAC
AACACAAAATgagtaagtatttatttttttcgttaAGGTTCATCCCTGTC
GTTTCCAAACTCAGGTTAACAGGGCCTCCTTAACACAAATGGACTGCTCT
CAGATATAATGGTCTGTACAAATTAATAAAACGTCATCCAAATGATTTCA
TTGATTCCCATATAGCCATTTCCAAACAGACAAAATGTTGCTTTTCATTG
ATCACTTTTTTTCTTCGGAAAAAACGGTCTGTAAAATAACAATAAGCCAT
CAAATGGTCACAAaaacattttggatgttcttattaccTCACATTTGACA
CTGTTCTTTAGAATGCAGTGTTTTTTCAAGCTGTTTAGAAAAGTTTTTGg
ccttatgaaaaaatatttcgactAGCTTTGCTGCAAGCTCATGCTAATTT
TTATCGaactaaattttgttttaacttTTCGCCATTATCGAATAAGACGT
TCAAATCTGGAGAANNaaccactattttgaagatttcgagacgaagaagc
atttacaaaaattttccgcaaaaatttttattgttcggtaaaagatacac
catctactgcgaaaaatatttcaaaatgcNNNatgtataacatgccatag
ttttgttggttacatcagtcagaaaacacattttaaacacggcaattatg
aaaaattcactatggtcagagcccttaagtacgCAATTCGAACGTTTAGC
TTTCATACGTAATAATGGAAGTTACATAACGGACGTTaacttaaaaacat
caaaaatccCTATAGCTATATCTCTATGGAATGCCACCACATCTCAAATT
TTCATTCACCCTTGTAAACTTTGTTTGAATTGAAACGGGCCTTCTAAACA
AACGTAGGTTGAAATGTACAATCGAGGTTATCCATGAAAAGGCTTTTGTA
GAAatcttaatgttttttttttacattacagactttttgaaattagttGT
AACACTTTTGGCAACCATTGCGTTGATCAATGAAAGTGAAGCAATGCCAC
CGCCACCACCGCCGCCATCTAATCAACAACAATCTCAGCAACAACAAGAA
CAAACCCAACAACAGCAAGAACAAACTCAAGAACAGCAGCAACAAACACA
ACAACAATCATCAGATCAACAGTTAGTTCAACCAGCGCAAATCTCACAAG
TTACAAGCGAAGAAGCACCGGTAATAACACCAGTTAAATTTCTAGTGGCA
GGGGAttctatcgtctacacaagatcactaaaaaagggaaaagtTTAGAA
AGCAGGATAAATTTAAAAACGGTGGTAAGCCcggcggagtaagcagtggc
ggggGTGTTTACAGTGTTTGTTCCAAAGTCTACTGCCactttttttcccg
taaaccgccctgacacCTTGACTCTGCGCGTATAGTTTTCCCGAgtttac
tgaccctctaacGGACAATAGCATCGTCTAGGGAGGAGGTTAAAAATCAG
ATAAAATGATGATGTTCATAAACATATAACTCATTTACAATGAACATTCT
CAAATATGTGACTTCCCAAGCGAAtaaaagtacctgaaaatcggACCGGC
TTTGTTACGGCATTATGAGTGGTCTAGTAGAGGTCAAATTGTTGCTTCAG
ATCGGCCTTCATACCCTCTAGAAAATAGCGGTCCTGGTCTCTCGTTGGGC
CGGTCGTGACCGCTCCTTAGACCTGATCTGGCCGTTAGTTAGTGTTTGTT
GTTAGCTTACATCAATAAGTTATTATAAAAAGAAGTCTACTGATCGATAA
TGAGACCGGTCTGGACTTGAACGCGCTTCGATGTGGCCGCTAAATTCACA
GGAGTCGTAGCGGCCTTTTCGGAAAGTTTGTCAGTCATTTACTAACCCTA
TCAAAAGACCTGAAGAACGGCCCGATTTccaaaatacttaaaatcgcttg
aggAATCACATGTTATAAGTTAAAGTGAGCATAATAATTCAGTTCCTTTG
AAAACaaacacccttacagtgtactttgggAAACTTGGAAAAGGGACCTT
TgaagggccgcacgtatggtaggTCGCTTACCTTGAGTGGGATACCCCCG
GTGGTATCTCTAGTTTcttaacccagctggcacacaacgttgtttcaacg
ttcacctaacgttatatggacgacacaacgttgtgtgccagctaggaACA
TTAAACGCCAtgtctttatttttctatttgtaGGAATGCCCAATGGAGCA
ATTACCATGTACAATATGTTCAGAAGGACTAAAAACAAAATGTGGTTGTA
AACCAGGTTGTGGCGAATGCACATCGATACCAGGCTGGAATTATAGCTTC
TGCTCGAATAAAGTCGAAGGACGCCCGTTAGATTAGAAACAAGTTTGAAG
GAGGCTCAACGAAAGCTAACAACTGTCATATAACCCTAGATAAATTTGTT
GTTAAATGAGGATTTGAATGATTTTGTAGAGAATATAGCTTATATTTGAT
GTACTTGttactgtacacgttttttattagaacatccaccatctttgaag
acttcagatgttcttaacttttttagtactaagccca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000010-exon-sc0000001-1491911889:314485..314646 | TCONS_00000010-exon-sc0000001-1491911889:314485..314646 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1510915933:314485..314646 | TCONS_00000010-exon-sc0000001-1510915933:314485..314646 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1575043694:314485..314646 | TCONS_00000010-exon-sc0000001-1575043694:314485..314646 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1491911889:315566..315804 | TCONS_00000010-exon-sc0000001-1491911889:315566..315804 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1510915933:315566..315804 | TCONS_00000010-exon-sc0000001-1510915933:315566..315804 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1575043694:315566..315804 | TCONS_00000010-exon-sc0000001-1575043694:315566..315804 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1491911889:316818..317171 | TCONS_00000010-exon-sc0000001-1491911889:316818..317171 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1510915933:316818..317171 | TCONS_00000010-exon-sc0000001-1510915933:316818..317171 | Clytia hemisphaerica | exon |
| TCONS_00000010-exon-sc0000001-1575043694:316818..317171 | TCONS_00000010-exon-sc0000001-1575043694:316818..317171 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:314485..317171 + |
Blast
The following BLAST results are available for this feature:
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