TCONS_00073829-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073829-protein
Unique Name	TCONS_00073829-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	592

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073829-protein ID=TCONS_00073829-protein|Name=TCONS_00073829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MENLNIIFLLVILLFDKQECAPSDVYDEELSIKQLQSGHVYSQFQFVTTW
NVNVFEQQIPPHYNFFPKSFGEILSKFGIVELHFSMTQGRWRHNKWGYPL
DSAPTGVELWVWFHPNLNSSVVDKNWSGLVHSLSGQFCSSINFISKAETT
SPEFSFKPLGVWPEDTLSPRQHLRYATIPRETVCTENLTPWKKMLPCGNS
GGVGLASLLNAVKLYDSSYHSLAVHLRSVCQAGDCSKLALEYKQSVASVF
DPHHRGFNGGWNLRSLFGGVITSRCPLARNSQVIIHTDKIDGLNPNHFEK
KIILVSGKDVEYAVFDLTKKDLVKFPFDVQVKMKNRATVTDLKSSYILVH
KYTTGYGEEYGGSTCIVRNTHAHKNITLSYLDVIPYFARVYLHTLKLQVN
GVQIKPDNLKYTPCYHRERPAKLEFLFTIPPQSDVTISIQFEKIFQDWMQ
HPPDSHHGFYMSSSVISGIVPFHEELVETIPSLHHSMFRERFGTTSDEMV
FRRIYSEPLLLRIPLPDFSMPYNVICLTCTVIAIGFGSIYNLTTRTFQVE
EVKEKRTLKEKILGLFRKTETLENEEEENSDGYILPIILHDI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045848	XLOC_045848	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073829	TCONS_00073829	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007245	PIG-T

Vocabulary: **Biological Process**
Term	Definition
GO:0016255	attachment of GPI anchor to protein

Vocabulary: **Cellular Component**
Term	Definition
GO:0042765	GPI-anchor transamidase complex

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016255	attachment of GPI anchor to protein
cellular_component	GO:0042765	GPI-anchor transamidase complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007245	GPI transamidase component PIG-T	PFAM	PF04113	Gpi16	coord: 18..561 e-value: 1.2E-138 score: 463.0

Blast

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BLAST of TCONS_00073829-protein vs. Swiss-Prot (Human)
Match: PIGT (GPI transamidase component PIG-T OS=Homo sapiens GN=PIGT PE=1 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.824e-137
Identity = 224/562 (39.86%), Postives = 318/562 (56.58%), Query Frame = 0

Query:   22 PSDVYDEELSIKQLQSGHVYSQFQFVTTWNVNVFEQQIPPHYNFFPKSFGEILSKFGIVELHFSMTQGRWRHNKWGYPLDSAPTGVELWVWFHPNLNSSVVDKNWSGLVHSLSGQFCSSINFISKAETTSPEFSFKPLGVWPEDTLSPRQHLRYATIPRETVCTENLTPWKKMLPCGNSGGVGLASLLNAVKLYDSSYHSLAVHLRSVCQAGDCSKLALEYKQSVASVFDPHHRG-FNGGWNLRSLFGGVITSRCPLARNSQVIIHTDKIDGLN--------PNHFEKKIILVSGKDVEYAVFDLTKKDLVKFP--FDVQVKMKNRATVTDLKSSYILVHKYTTGYGEEYGGSTCIVRNTHAHKNITLSYLDVIPYFARVYLHTLKLQVNGVQIKPDNLKYTPCYHRERPAKLEFLFTIPPQSDVTISIQFEKIFQDWMQHPPDSHHGFYMSSSVISGIVPFHEELVETIPS--LHHSMFRERFGTTSDEMVFRRIYSEPLLLRIPLPDFSMPYNVICLTCTVIAIGFGSIYNLTTRTFQVEEVKEKRTLKEKILGLFRKTE 570
            P D   EEL I  L SG V + FQF T W+  +  + +  HY  FPK+ G+++SK+ + ELH S TQG WR   WG P   AP+G ELWVWF   +    VDK+W  L + LSG FC+S+NFI    T +P  SFKPLG+   DT      LRYA +PRE VCTENLTPWKK+LPC  S   GL+ LL A +L+ +SYHS AVH+R VC+   C+ ++ E +Q+++ VFD    G     W+L  +F   +T  CPLA  S+V +     +  N        P    + +IL  G    YA++DL    ++      ++Q+K K           ++   +Y +GYG + G  + ++ NTH ++   +  LD +P++ R+Y+HTL +   G + KP  + Y P   R +P  LE L  +P  S   +SIQFE+    W ++ PD +HGFY+S SV+S +VP    +V   P       +F   F  +     F R+Y+EPLL+ +P PDFSMPYNVICLTCTV+A+ +GS YNL TRTF +EE +    L +++  L R+  
Sbjct:   26 PRDSLREELVITPLPSGDVAATFQFRTRWDSELQREGVS-HYRLFPKALGQLISKYSLRELHLSFTQGFWRTRYWGPPFLQAPSGAELWVWFQDTVTD--VDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGL-ANDT--DHYFLRYAVLPREVVCTENLTPWKKLLPC--SSKAGLSVLLKADRLFHTSYHSQAVHIRPVCRNARCTSISWELRQTLSVVFDAFITGQGKKDWSLFRMFSRTLTEPCPLASESRVYVDITTYNQDNETLEVHPPPTTTYQDVIL--GTRKTYAIYDLLDTAMINNSRNLNIQLKWKRPPENEAPPVPFLHAQRYVSGYGLQKGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPAQDRLQPHLLEMLIQLPANSVTKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVP---SMVAAKPVDWEESPLFNSLFPVSDGSNYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTG-GLAKRLANLIRRAR 573

The following BLAST results are available for this feature:

BLAST of TCONS_00073829-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073829-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
PIGT	4.824e-137	39.86	GPI transamidase component PIG-T OS=Homo sapiens G...	[more]

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TCONS_00073829-protein (polypeptide) - C. hemisphaerica

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