TCONS_00073783-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073783-protein
Unique NameTCONS_00073783-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073783-protein ID=TCONS_00073783-protein|Name=TCONS_00073783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
QGSILGPVLFNLYVVELSDQVTSSSIQYADDTTLYRHCKLKDLQQTIKDM
EKDVENLQSWSEDSNLLFNSDKLQLIIFHSQRLRNFPKNQSQLFRCSGRS
IEHKTYVKLLGVYLDHNLTWSTHINEIIKSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045829XLOC_045829Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073783TCONS_00073783Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
QGSILGPVLFNLYVVELSDQVTSSSIQYADDTTLYRHCKLKDLQQTIKDMEKDVENLQSWSEDSNLLFNSDKLQLIIFHSQRLRNFPKNQSQLFRCSGRSIEHKTYVKLLGVYLDHNLTWSTHINEIIKSS102030405060708090100110120130Score = Expect = 5.9E-11 / Score = 41.8Expect = 6.0E-11 / Score = 42.2Score = 10.167SequenceCoilG3DSA:3.30.70.270PF00078PS50878
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableGENE3D3.30.70.270coord: 1..112
e-value: 5.9E-11
score: 41.8
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 1..113
e-value: 6.0E-11
score: 42.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..114
score: 10.167

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073783-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
QGSILGPVLFNLYVVELSDQVTSSSIQYADDTTLYRHCKLKDLQQTIKDMEKDVENLQSWSEDSNLLFNSDKLQLIIFHSQRLRNFPKNQSQLFRCSGRSIEHKTYVKLLGVYLDHNLTWSTHINEIIKSS102030405060708090100110120130Sequence
Match NameE-valueIdentityDescription
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