TCONS_00073707-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073707-protein
Unique Name	TCONS_00073707-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	518

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073707-protein ID=TCONS_00073707-protein|Name=TCONS_00073707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MKAESYLCISAFFTFWGDRMWQFATGIFLIQLTPESLRLAATYGLCLSLI
AIIFSPMIGDWVDRTARLEVIQLLLLIQNSLVVVCAITIYLCMRYKTGNL
QLFLQALIILLGSAANLASQGQKIAIGKDWIVVVCKQDKDLLAHTNALLR
RIDLTVAILAPLVVGFLMSGISTLAGIIFICVWNVVSLFFEYGFLLKVYN
LTPDLSVKNNTKKPKNNPDDDNHAAKTEDAKSNQVEEIQVAVTNANKETS
SWNLIKRVQLVISGWHIYYRQTVFLAGCSLSMLYLTVIGFSAITTGFAYE
LGLSELYVSICMGLGSLFGVFGTLLFPKIRNRLGLVKSGIVGFLLQLSML
VFCVASIWMPGSPSNLYNGKQFIISALPATNMTALNTTSGNHTGPTLQPT
VTPKPQRILTSIIFLMTGIILSRTGLWLSDLTITQLQQEYVSESERGIVG
GVQYASNCLLDLVHFLLTISLPKPDQFGILILISFCAIGCAGFIYLVFVS
RFHSSVKQDANKYKTMED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045765	XLOC_045765	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073707	TCONS_00073707	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009716	Ferroportin-1
IPR020846	MFS_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0034755	iron ion transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005381	iron ion transmembrane transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034755	iron ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005381	iron ion transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009716	Ferroporti-1	PFAM	PF06963	FPN1	coord: 3..488 e-value: 1.7E-132 score: 442.0
None	No IPR available	GENE3D	1.20.1250.20		coord: 5..197 e-value: 0.11 score: 11.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 261..515 e-value: 3.1E-11 score: 42.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..233
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 413..501 coord: 255..366 coord: 7..213

Blast

[Close]

BLAST of TCONS_00073707-protein vs. Swiss-Prot (Human)
Match: S40A1 (Solute carrier family 40 member 1 OS=Homo sapiens GN=SLC40A1 PE=1 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.634e-111
Identity = 200/515 (38.83%), Postives = 290/515 (56.31%), Query Frame = 0

Query:   16 WGDRMWQFATGIFLIQLTPESLRLAATYGLCLSLIAIIFSPMIGDWVDRTARLEVIQLLLLIQNSLVVVCAITIYLCMRYKTGNLQLF-------LQALIILLGSAANLASQGQKIAIGKDWIVVVCKQDKDLLAHTNALLRRIDLTVAILAPLVVGFLMSGISTLAGIIFICVWNVVSLFFEYGFLLKVYNLTPDLSVK-------------NNTKKPKNNPDDDNHAAKTEDAKSNQVEEIQVAVTNANKETSSWNLIKRVQLVISGWHIYYRQTVFLAGCSLSMLYLTVIGFSAITTGFAYELGLSELYVSICMGLGSLFGVFGTLLFPKIRNRLGLVKSGIVGFLLQLSMLVFCVASIWMPGSP------------SNLYNGKQFIISALPATNMTALNTTSGNHTGPTLQPTVTPKPQRILTSIIFLMTGIILSRTGLWLSDLTITQLQQEYVSESERGIVGGVQYASNCLLDLVHFLLTISLPKPDQFGILILISFCAIGCAGFIYLVF 498
            WGDRMW FA  +FL++L   SL L A YGL ++   ++   +IGDWVD+ ARL+V Q  L++QN  V++C I + +   +K   L ++          LII + + ANLAS    I I +DWIVVV  +D+  LA+ NA +RRID    ILAP+ VG +M+  S + G  FI  WN+VS+  EY  L KVY  TP L+VK             N  K  +  P +  H    +D+  +++E  Q       + T +  + +  +    GW  YY Q VFLAG  L+ LY+TV+GF  ITTG+AY  GLS   +SI MG  ++ G+ GT+ F  +R + GLV++G++  L QLS L+ CV S++MPGSP            S    G+    + +P    T +  ++G+++   + P  +P+   I+ S+  L  G+I +R GLW  DLT+TQL QE V ESERGI+ GVQ + N LLDL+HF++ I  P P+ FG+L+LIS   +     +Y  F
Sbjct:   37 WGDRMWHFAVSVFLVELYGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLTMYHGWVLTSCYILIITIANIANLASTATAITIQRDWIVVVAGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCVEYVLLWKVYQKTPALAVKAGLKEEETELKQLNLHKDTEPKPLEGTHLMGVKDSNIHELEHEQ-------EPTCASQMAEPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGFDCITTGYAYTQGLSGSILSILMGASAITGIMGTVAFTWLRRKCGLVRTGLISGLAQLSCLILCVISVFMPGSPLDLSVSPFEDIRSRFIQGESITPTKIPEIT-TEIYMSNGSNSA-NIVPETSPESVPII-SVSLLFAGVIAARIGLWSFDLTVTQLLQENVIESERGIINGVQNSMNYLLDLLHFIMVILAPNPEAFGLLVLISVSFVAMGHIMYFRF 541

The following BLAST results are available for this feature:

BLAST of TCONS_00073707-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073707-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S40A1	7.634e-111	38.83	Solute carrier family 40 member 1 OS=Homo sapiens ...	[more]

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TCONS_00073707-protein (polypeptide) - C. hemisphaerica