TCONS_00073634-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073634-protein
Unique NameTCONS_00073634-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length280

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073634-protein ID=TCONS_00073634-protein|Name=TCONS_00073634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
KILKAKDDQRLAEEQTQENRIIYDANNNIVDILRPHYQYGRKTEENSSEE
GEPPEEEYLRGRYRVANDDHDNVDYRKISVSDSFDDDEDIYYQERYTETH
KRIYEYERQNNGPLQFQRAPSYAKKMGVEGEEYIPSSQKPFVCTICGKSF
RLSSTLCRHKIIHTSERPHKCFVCSKSFNRSSTLKTHLRTHNQTKEFVCR
TCGKGFHQKGNLRNHILIHTGEKPYACKVCGKAFNKLSNLKFHAHIHTDQ
KPYRCRYCKLAMGRRGELKHHIRTCHPEGV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045724XLOC_045724Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073634TCONS_00073634Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 253..276
e-value: 0.27
score: 20.3
coord: 225..247
e-value: 0.049
score: 22.8
coord: 169..191
e-value: 0.0053
score: 26.0
coord: 141..163
e-value: 0.01
score: 25.0
coord: 197..219
e-value: 0.0014
score: 27.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 171..191
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 227..247
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..276
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 199..219
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 143..163
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 169..196
score: 12.923
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 197..224
score: 16.082
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 141..168
score: 15.23
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 225..252
score: 15.251
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 139..191
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 219..271
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 177..234
NoneNo IPR availableGENE3D2.40.155.10coord: 192..230
e-value: 2.0E-26
score: 92.9
NoneNo IPR availableGENE3D2.30.30.380coord: 93..145
e-value: 1.2E-5
score: 24.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 197..219
e-value: 1.1E-4
score: 22.4
coord: 141..163
e-value: 2.5E-4
score: 21.2
coord: 169..191
e-value: 5.8E-5
score: 23.2
coord: 225..247
e-value: 0.011
score: 16.1
NoneNo IPR availableGENE3D3.30.160.60coord: 250..278
e-value: 6.8E-7
score: 28.8
NoneNo IPR availableGENE3D2.20.25.10coord: 161..174
e-value: 3.8E-7
score: 29.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 231..249
e-value: 8.6E-18
score: 63.6
coord: 175..191
e-value: 8.1E-13
score: 47.7
coord: 146..160
e-value: 6.2E-11
score: 41.7

Blast
[Close]
BLAST of TCONS_00073634-protein vs. Swiss-Prot (Human)
Match: FEZF2 (Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 2.104e-53
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 0 
Query:  136 SSQKPFVCTICGKSFRLSSTLCRHKIIHTSERPHKCFVCSKSFNRSSTLKTHLRTHNQTKEFVCRTCGKGFHQKGNLRNHILIHTGEKPYACKVCGKAFNKLSNLKFHAHIHTDQKPYRCRYCKLAMGRRGELKHHIRTCH 276
            +  +PFVC +CGK FR +STLCRHKIIHT E+PHKC  C K+FNRSSTL TH+R H   K FVC  CGKGFHQKGN +NH L H+GEK Y C +C KAF+++ NL FH H H D+KP+ C  C     R  +LK H+R  H
Sbjct:  300 TGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFTCATCGKGFCRNFDLKKHVRKLH 440
The following BLAST results are available for this feature:
BLAST of TCONS_00073634-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FEZF22.104e-5358.16Fez family zinc finger protein 2 OS=Homo sapiens G... [more]
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