Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073634-protein ID=TCONS_00073634-protein|Name=TCONS_00073634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0003676 nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
20 40 60 80 100 120 140 160 180 200 220 240 260 280 Expect = 0.01 / Score = 25.0 Expect = 0.0053 / Score = 26.0 Expect = 0.0014 / Score = 27.9 Expect = 0.049 / Score = 22.8 Expect = 0.27 / Score = 20.3 Score = Score = Score = Score = Score = Score = 12.923 Score = 16.082 Score = 15.23 Score = 15.251 Score = Score = Score = Expect = 2.0E-26 / Score = 92.9 Expect = 1.2E-5 / Score = 24.8 Expect = 2.5E-4 / Score = 21.2 Expect = 5.8E-5 / Score = 23.2 Expect = 1.1E-4 / Score = 22.4 Expect = 0.011 / Score = 16.1 Expect = 6.8E-7 / Score = 28.8 Expect = 3.8E-7 / Score = 29.5 Expect = 6.2E-11 / Score = 41.7 Expect = 8.1E-13 / Score = 47.7 Expect = 8.6E-18 / Score = 63.6 Sequence SM00355 PS00028 PS00028 PS00028 PS00028 PS00028 PS50157 PS50157 PS50157 PS50157 SSF57667 SSF57667 SSF57667 G3DSA:2.40.155.10 G3DSA:2.30.30.380 PF00096 G3DSA:3.30.160.60 G3DSA:2.20.25.10 G3DSA:3.30.40.10
IPR Term IPR Description Source Source Term Source Description Alignment
IPR013087 Zinc finger C2H2-type SMART SM00355 c2h2final6 coord: 253..276 IPR013087 Zinc finger C2H2-type PROSITE PS00028 ZINC_FINGER_C2H2_1 coord: 171..191 IPR013087 Zinc finger C2H2-type PROSITE PS00028 ZINC_FINGER_C2H2_1 coord: 227..247 IPR013087 Zinc finger C2H2-type PROSITE PS00028 ZINC_FINGER_C2H2_1 coord: 255..276 IPR013087 Zinc finger C2H2-type PROSITE PS00028 ZINC_FINGER_C2H2_1 coord: 199..219 IPR013087 Zinc finger C2H2-type PROSITE PS00028 ZINC_FINGER_C2H2_1 coord: 143..163 IPR013087 Zinc finger C2H2-type PROSITE PS50157 ZINC_FINGER_C2H2_2 coord: 169..196 IPR013087 Zinc finger C2H2-type PROSITE PS50157 ZINC_FINGER_C2H2_2 coord: 197..224 IPR013087 Zinc finger C2H2-type PROSITE PS50157 ZINC_FINGER_C2H2_2 coord: 141..168 IPR013087 Zinc finger C2H2-type PROSITE PS50157 ZINC_FINGER_C2H2_2 coord: 225..252 IPR013087 Zinc finger C2H2-type SUPERFAMILY 57667 beta-beta-alpha zinc fingers coord: 139..191 IPR013087 Zinc finger C2H2-type SUPERFAMILY 57667 beta-beta-alpha zinc fingers coord: 219..271 IPR013087 Zinc finger C2H2-type SUPERFAMILY 57667 beta-beta-alpha zinc fingers coord: 177..234 None No IPR available GENE3D 2.40.155.10 coord: 192..230 None No IPR available GENE3D 2.30.30.380 coord: 93..145 None No IPR available PFAM PF00096 zf-C2H2 coord: 197..219 None No IPR available GENE3D 3.30.160.60 coord: 250..278 None No IPR available GENE3D 2.20.25.10 coord: 161..174 IPR013083 Zinc finger, RING/FYVE/PHD-type GENE3D 3.30.40.10 coord: 231..249
Blast
BLAST of TCONS_00073634-protein vs. Swiss-Prot (Human)
Match:
FEZF2 (Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2)
HSP 1 Score: 179.874 bits (455), Expect = 2.104e-53
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 0
Query: 136 SSQKPFVCTICGKSFRLSSTLCRHKIIHTSERPHKCFVCSKSFNRSSTLKTHLRTHNQTKEFVCRTCGKGFHQKGNLRNHILIHTGEKPYACKVCGKAFNKLSNLKFHAHIHTDQKPYRCRYCKLAMGRRGELKHHIRTCH 276
+ +PFVC +CGK FR +STLCRHKIIHT E+PHKC C K+FNRSSTL TH+R H K FVC CGKGFHQKGN +NH L H+GEK Y C +C KAF+++ NL FH H H D+KP+ C C R +LK H+R H
Sbjct: 300 TGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFTCATCGKGFCRNFDLKKHVRKLH 440
The following BLAST results are available for this feature:
