TCONS_00073592-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073592-protein
Unique NameTCONS_00073592-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073592-protein ID=TCONS_00073592-protein|Name=TCONS_00073592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MKSVKLNDGTTVSFDDVLKILLEKNFAKFEEIFRQKPNIVNSLRGGNGST
LLMRAVYGDRFDVFVHLMNCPQDFSLVNNYGLNVLHCVGYKGKVRHLEQF
DQQSIEKLIDGRDKDNDTPLHDAASRNNHDVIRWLLAHGADHELKDSRGQ
RPDEHPDCDGVTKEIFRSFRSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045693XLOC_045693Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073592TCONS_00073592Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
MKSVKLNDGTTVSFDDVLKILLEKNFAKFEEIFRQKPNIVNSLRGGNGSTLLMRAVYGDRFDVFVHLMNCPQDFSLVNNYGLNVLHCVGYKGKVRHLEQFDQQSIEKLIDGRDKDNDTPLHDAASRNNHDVIRWLLAHGADHELKDSRGQRPDEHPDCDGVTKEIFRSFRSS20406080100120140160Score = 13.117Expect = 1.3E-21 / Score = 76.3Expect = 7.7E-10 / Score = 39.1Score = 17.608Score = Expect = 6.35543E-16 / Score = 68.9494SequenceSM00248PS50088G3DSA:1.25.40.20PF12796PS50297SSF48403cd00204
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 47..76
e-value: 170.0
score: 10.7
coord: 115..144
e-value: 4.0E-5
score: 33.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 13.117
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 13..153
e-value: 1.3E-21
score: 76.3
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 52..146
e-value: 7.7E-10
score: 39.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 47..152
score: 17.608
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 23..152
NoneNo IPR availableCDDcd00204ANKcoord: 47..152
e-value: 6.35543E-16
score: 68.9494

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073592-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
MKSVKLNDGTTVSFDDVLKILLEKNFAKFEEIFRQKPNIVNSLRGGNGSTLLMRAVYGDRFDVFVHLMNCPQDFSLVNNYGLNVLHCVGYKGKVRHLEQFDQQSIEKLIDGRDKDNDTPLHDAASRNNHDVIRWLLAHGADHELKDSRGQRPDEHPDCDGVTKEIFRSFRSS20406080100120140160Sequence
Match NameE-valueIdentityDescription
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