TCONS_00073525-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073525-protein
Unique NameTCONS_00073525-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length399

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073525-protein ID=TCONS_00073525-protein|Name=TCONS_00073525-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MLRLIFSLTLLIIAVHACSDKNTKCPKWKDDPRDLCNTHEYVIKNCKKSC
GRCEATCADKNVKCPKWKDDQRDLCNTHEYVIQNCKKSCGRCGGSATCAD
KNAKCPKWKDDRRDLCNTHEYVIQNCKKSCGRCGGSGGGSGGGSGGGGGS
GGSTGGSEGKCGVSRAAQSRIVGGTTARAGAWPWQVSLQIYNQHFCGGSI
LTSTWILTAAHCVDDKTERPNQVYVIAGAQNIKITESSQQRIRARRIIMH
PSFRRDENNTPISDIALIQLSSKLNMNDRVVRACLPQQGVYPTIGKRCYI
TGWGDLSFEGSSPARLQQAKLPVIRSDGETVDVGYNSPREGVSNACQGDS
GGPLSCQRDDGTWQVEGAASYVLNRCQYLSAYAPLNKYLSWVKRYVPGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045636XLOC_045636Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073525TCONS_00073525Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR003582ShKT_dom
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 260..274
score: 35.87
coord: 343..355
score: 62.75
coord: 197..212
score: 55.07
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 17..54
e-value: 0.032
score: 23.4
coord: 97..134
e-value: 4.6E-4
score: 29.5
coord: 56..93
e-value: 4.6E-4
score: 29.5
IPR003582ShKT domainPFAMPF01549ShKcoord: 18..53
e-value: 1.2E-4
score: 22.4
coord: 56..92
e-value: 6.2E-6
score: 26.6
coord: 97..133
e-value: 5.5E-5
score: 23.5
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 18..53
score: 10.372
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 57..92
score: 10.278
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 98..133
score: 10.073
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 170..392
e-value: 4.9E-62
score: 222.1
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 171..392
e-value: 7.6E-50
score: 169.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 171..397
score: 29.294
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 171..394
e-value: 9.82758E-65
score: 207.899
NoneNo IPR availableGENE3D2.40.10.10coord: 170..181
e-value: 2.6E-5
score: 23.4
NoneNo IPR availableGENE3D2.40.10.10coord: 281..397
e-value: 1.4E-21
score: 76.5
NoneNo IPR availableGENE3D2.40.10.10coord: 202..280
e-value: 1.2E-25
score: 88.9
NoneNo IPR availableGENE3D2.40.10.10coord: 182..201
e-value: 8.7E-20
score: 70.1
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 207..212
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 344..355
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 161..396

Blast
BLAST of TCONS_00073525-protein vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.752e-42
Identity = 89/249 (35.74%), Postives = 134/249 (53.82%), Query Frame = 0
Query:  169 SRIVGGTTARAGAWPWQVSLQIYNQ----HFCGGSILTSTWILTAAHCVDD-KTERPNQVYVIAGAQNIKITESSQQRIRARRIIMHPSFRRDENNTPIS---DIALIQLSSKLNMNDRVVRACLPQQGVYPTIGKRCYITGWGDLSFEGSSPARLQQAKLPVIRSDGETVDVGYNSPR---------EGVSNACQGDSGGPLSCQRDDGTWQVEGAASYVLNR-CQYL---SAYAPLNKYLSWVKRYV 396
            +R+VGG  AR  +WPWQVSLQ  +     H CGGS++ ++W+LTAAHC+   +T R     V  G  N+ + ES    +   +I++H    +D N+  IS   DIAL++L++ +++ D++  ACLP  G        CY+TGWG L   G+ P  LQQ +L V+     +    + S           +GV ++C GDSGGPL+CQ  DG WQV G  S+     C Y    S +  ++ Y+ W+   +
Sbjct:   27 TRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAHCISSSRTYR-----VGLGRHNLYVAESGSLAVSVSKIVVH----KDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVI 266          
The following BLAST results are available for this feature:
BLAST of TCONS_00073525-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A5.752e-4235.74Chymotrypsin-like elastase family member 2A OS=Hom... [more]
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