TCONS_00073520-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073520-protein
Unique NameTCONS_00073520-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073520-protein ID=TCONS_00073520-protein|Name=TCONS_00073520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MIAMTATATSSVRQDIIDSLELYQPYISVAVPFKPNVKYFLHCNSTRNVE
QIFLPYVKDIQNNGFEAERVIVFCRTSHLLRKLFALFDGKFSSNYPDLLV
RPYARYHAHTDDEVKAMINDSLAQPYGKVRFLMASIAFGMGVDCKGLYTV
IHFGAPSDIDDYFQESGRVGRDGAQSQAILLTSLAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045634XLOC_045634Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073520TCONS_00073520Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 74..173
e-value: 2.1E-8
score: 43.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 66..172
e-value: 9.7E-12
score: 45.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 48..186
score: 12.232
NoneNo IPR availableGENE3D3.40.50.300coord: 34..185
e-value: 2.4E-20
score: 72.3
NoneNo IPR availableCDDcd00079HELICccoord: 68..181
e-value: 3.80956E-15
score: 67.2628
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..26
score: 7.428
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..183

Blast
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BLAST of TCONS_00073520-protein vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.169e-21
Identity = 62/186 (33.33%), Postives = 98/186 (52.69%), Query Frame = 0 
Query:    1 MIAMTATATSSVRQDIIDSLELYQPYISVAVPFKPNVKYFLHCNSTRNVEQIFLPY-VKDIQNNGFEAERVIVFCRTSHLLRKLFALFDGKFSSNYPDLLVRPYARYHAHTDDEVKAMINDSLAQPYGKVRFLMASIAFGMGVDCKGLYTVIHFGAPSDIDDYFQESGRVGRDGAQSQAILLTSLA 185
            ++A+TATA+SS+R+DI+  L L  P I+     +PN+ Y      T N+ Q   P+ VK   +  FE    I++C +    RK+     G+        L      YHA      +  I+    +   +++ ++A+IAFGMG++   +  VIH+GAP D++ Y+QE GR GRDG QS   +L + A
Sbjct:  699 IVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNL-YLEVRRKTGNILQDLQPFLVKTSSHWEFEGP-TIIYCPS----RKMTQQVTGELRK-----LNLSCGTYHAGMSFSTRKDIHHRFVR--DEIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPA 871
The following BLAST results are available for this feature:
BLAST of TCONS_00073520-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRN1.169e-2133.33Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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