Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073490-protein ID=TCONS_00073490-protein|Name=TCONS_00073490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005509 calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005509 calcium ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Expect = 0.0014 / Score = 27.9 Expect = 0.001 / Score = 28.4 Expect = 24.0 / Score = 6.6 Expect = 3.8E-12 / Score = 46.4 Expect = 0.022 / Score = 14.4 Score = 8.851 Score = 5.922 Score = 12.812 Score = 12.003 Expect = 2.30471E-16 / Score = 71.0397 Expect = 2.8E-18 / Score = 65.2 Expect = 2.5E-6 / Score = 26.8 Expect = 3.7E-11 / Score = 42.2 Expect = 0.082 / Score = 12.3 Expect = 3.6E-9 / Score = 36.2 Score = Score = Score = Sequence SM00054 PF13499 PF13833 PS50222 PS50222 PS50222 PS50222 cd00051 G3DSA:1.10.238.10 G3DSA:1.10.238.10 G3DSA:1.10.238.10 mobidb-lite PS00018 SSF47473
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002048 EF-hand domain SMART SM00054 efh_1 coord: 82..110 IPR002048 EF-hand domain PFAM PF13499 EF-hand_7 coord: 46..107 IPR002048 EF-hand domain PFAM PF13833 EF-hand_8 coord: 148..177 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 148..183 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 115..147 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 42..77 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 78..113 IPR002048 EF-hand domain CDD cd00051 EFh coord: 46..108 None No IPR available GENE3D 1.10.238.10 coord: 61..94 None No IPR available GENE3D 1.10.238.10 coord: 165..296 None No IPR available GENE3D 1.10.238.10 coord: 131..164 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 185..320 IPR018247 EF-Hand 1, calcium-binding site PROSITE PS00018 EF_HAND_1 coord: 91..103 IPR011992 EF-hand domain pair SUPERFAMILY 47473 EF-hand coord: 25..182
Blast
BLAST of TCONS_00073490-protein vs. Swiss-Prot (Human)
Match:
CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)
HSP 1 Score: 119.398 bits (298), Expect = 3.532e-33
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 0
Query: 39 FTDAEISEVKEAFGLYDKQRNGYISRKSFLTVMRSLGQNPTEDEYDDMLNEVDADRNGLIEFSEFLYLVARHT--TNFEETAKYLFHVFDHRGTGYLNKTQLCDVMS-LDRGLTSNDIEDLLSFFNSDRNNNVDIDEFVRVL 177
T+ +I+E KEAF L+DK +G I+ K TVMRSLGQNPTE E DM+NEVDAD NG I+F EFL ++AR T+ EE + F VFD G GY++ +L VM+ L LT ++++++ + D + V+ +EFV+++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
