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TCONS_00073490-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073490-protein
Unique NameTCONS_00073490-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073490-protein ID=TCONS_00073490-protein|Name=TCONS_00073490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MGMLFSKNKLVMKSNSKDNLSDIYIVPPSLKMELELINFTDAEISEVKEA
FGLYDKQRNGYISRKSFLTVMRSLGQNPTEDEYDDMLNEVDADRNGLIEF
SEFLYLVARHTTNFEETAKYLFHVFDHRGTGYLNKTQLCDVMSLDRGLTS
NDIEDLLSFFNSDRNNNVDIDEFVRVLKYLPTSYDEEDQQNSATSPTQQT
SKKGGKLPNKTLHPNTSEQKTESMQNTKNLKNSNSNNTSKQINNTSPKKT
KTQTSQSSSKNESDKKQTRDNNNTKSTKTQKVSNKNGSVSKPSEKHGAKK
ALNTKIAVHENGKTTVGIEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045614XLOC_045614Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073490TCONS_00073490Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 82..110
e-value: 0.001
score: 28.4
coord: 152..180
e-value: 24.0
score: 6.6
coord: 46..74
e-value: 0.0014
score: 27.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 46..107
e-value: 3.8E-12
score: 46.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 148..177
e-value: 0.022
score: 14.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 148..183
score: 8.851
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 115..147
score: 5.922
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 42..77
score: 12.812
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 78..113
score: 12.003
IPR002048EF-hand domainCDDcd00051EFhcoord: 46..108
e-value: 2.30471E-16
score: 71.0397
NoneNo IPR availableGENE3D1.10.238.10coord: 61..94
e-value: 2.8E-18
score: 65.2
NoneNo IPR availableGENE3D1.10.238.10coord: 165..296
e-value: 0.082
score: 12.3
coord: 9..60
e-value: 2.5E-6
score: 26.8
coord: 95..130
e-value: 3.7E-11
score: 42.2
NoneNo IPR availableGENE3D1.10.238.10coord: 131..164
e-value: 3.6E-9
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..320
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 91..103
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 25..182

Blast
BLAST of TCONS_00073490-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.532e-33
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 0
Query:   39 FTDAEISEVKEAFGLYDKQRNGYISRKSFLTVMRSLGQNPTEDEYDDMLNEVDADRNGLIEFSEFLYLVARHT--TNFEETAKYLFHVFDHRGTGYLNKTQLCDVMS-LDRGLTSNDIEDLLSFFNSDRNNNVDIDEFVRVL 177
             T+ +I+E KEAF L+DK  +G I+ K   TVMRSLGQNPTE E  DM+NEVDAD NG I+F EFL ++AR    T+ EE  +  F VFD  G GY++  +L  VM+ L   LT  ++++++   + D +  V+ +EFV+++
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146          
The following BLAST results are available for this feature:
BLAST of TCONS_00073490-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM33.532e-3345.07Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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