Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073486-protein ID=TCONS_00073486-protein|Name=TCONS_00073486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
MSSESQLNDWTVKQLQEELKKRKLSIYGRKSVLVERLFDLAKTEEVRNRN
SEMMSTDNENTVKHTQSSEELKEQRHQDREQRKKIVIWRKPLLTIHYFIL
ELFELIKQEKESISKHRKTCSILAIISFLVLSVYTWDGPHQSYVSGIEKY
LLWCGYWVGLGILSSVGLGTGLHTFLLYLGPHIAKVTLAAWECGSLNFPE
PPYPETILCPDSVADDSSTPINMFSIMSKVRLEAVMWGAGTAIGELPPYF
MARAARLSGEDDVDNEDLEELEDLISSDDQGLFTRLKKAVPQIVERVGFF
GILAFASIPNPLFDLAGITCGHCLVPFWTFFGATLIGKSIIKMHIQQTFV
ILCFSKRYVEQLLEFLSGVPYVGSYIQYPLERAVRAQKSKLHGASSGKAG
EDGNILGFIFEKFVTIMVVYFIISIVNSLAQSYAKKVDETKRQLNNGVGV
VPPKADKAD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003034 | SAP_dom |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00073486-protein vs. Swiss-Prot (Human)
Match: VMP1 (Vacuole membrane protein 1 OS=Homo sapiens GN=VMP1 PE=1 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 2.095e-144 Identity = 208/361 (57.62%), Postives = 270/361 (74.79%), Query Frame = 0 Query: 83 KKIVIWRKPLLTIHYFILELFELIKQEKESISKHRKT--CSILAIISFLVLSVYTWDGPHQSYVSGIEKYLLWCGYWVGLGILSSVGLGTGLHTFLLYLGPHIAKVTLAAWECGSLNFPEPPYPETILCPDSVADDSSTPINMFSIMSKVRLEAVMWGAGTAIGELPPYFMARAARLSGEDDVDNEDLEELEDLI--SSDDQGLFTRLKKAVPQIVERVGFFGILAFASIPNPLFDLAGITCGHCLVPFWTFFGATLIGKSIIKMHIQQTFVILCFSKRYVEQLLEFLSGVPYVGSYIQYPLERAVRAQKSKLHGASSGKAGEDGNILGFIFEKFVTIMVVYFIISIVNSLAQSYAKKVDE 439
+ IV+WR+PL+T+ YF LE+ ++K E S HR++ S L +++ L+ + Y +G HQ YV IEK L YW+GLGILSSVGLGTGLHTFLLYLGPHIA VTLAA+EC S+NFPEPPYP+ I+CPD + + I+++SI+SKVR+EA MWG GTAIGELPPYFMARAARLSG + D+E+ +E E+++ + Q +R K AV ++V++VGFFGILA ASIPNPLFDLAGITCGH LVPFWTFFGATLIGK+IIKMHIQ+ FVI+ FSK VEQ++ F+ VP +G +Q P + + AQ+ KLH S + N L ++FEK V +MV YFI+SI+NS+AQSYAK++ +
Sbjct: 42 QNIVLWRQPLITLQYFSLEILVILK-EWTSKLWHRQSIVVSFLLLLAVLIATYYV-EGVHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGT--ISLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEP-DDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVEQMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVVVMVCYFILSIINSMAQSYAKRIQQ 397
The following BLAST results are available for this feature:
BLAST of TCONS_00073486-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| VMP1 | 2.095e-144 | 57.62 | Vacuole membrane protein 1 OS=Homo sapiens GN=VMP1... | [more] |
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