TCONS_00073482-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073482-protein
Unique NameTCONS_00073482-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073482-protein ID=TCONS_00073482-protein|Name=TCONS_00073482-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MSKPRWLPLESNPDVMNKYTENLGVDMSVLAYSDVYGFEPDLLMMVPRPV
VSLVLLFPITENYENFRKEEEEKITKEGQTVSDNVYFTKQTVGNACGTVG
IIHAIANNVEKLTFKDGSVVKDYLDSTKSMTPDERAVALEKHEGVTRCHG
DSAQEGQTKAPSIDEKVDLHFIAFVEKDGFLYELDGRKPFPINHGKTSAD
TLLEDTAVVCKKFMERDPGNYNFNMIALAQKAF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045610XLOC_045610Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073482TCONS_00073482Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001578Peptidase_C12_UCH
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005622 intracellular
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePRINTSPR00707UBCTHYDRLASEcoord: 46..58
score: 64.84
coord: 165..176
score: 57.14
coord: 90..107
score: 66.67
coord: 8..25
score: 53.17
coord: 181..191
score: 80.52
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolaseGENE3D3.40.532.10coord: 1..231
e-value: 3.0E-76
score: 255.3
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePFAMPF01088Peptidase_C12coord: 6..214
e-value: 2.8E-61
score: 206.9
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePROSITEPS00140UCH_1coord: 90..106
NoneNo IPR availableCDDcd09616Peptidase_C12_UCH_L1_L3coord: 6..228
e-value: 1.2967E-117
score: 336.53
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 4..230

Blast
[Close]
BLAST of TCONS_00073482-protein vs. Swiss-Prot (Human)
Match: UCHL3 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.123e-103
Identity = 140/229 (61.14%), Postives = 175/229 (76.42%), Query Frame = 0 
Query:    1 MSKPRWLPLESNPDVMNKYTENLGVDMSVLAYSDVYGFEPDLLMMVPRPVVSLVLLFPITENYENFRKEEEEKITKEGQTVSDNVYFTKQTVGNACGTVGIIHAIANNVEKLTFKDGSVVKDYLDSTKSMTPDERAVALEKHEGVTRCHGDSAQEGQTKAPSIDEKVDLHFIAFVEKDGFLYELDGRKPFPINHGKTSADTLLEDTAVVCKKFMERDPGNYNFNMIALA 229
            M   RWLPLE+NP+V N++ + LG+  +   + DVYG +P+LL MVPRPV +++LLFPITE YE FR EEEEKI  +GQ V+ +VYF KQT+ NACGT+G+IHAIANN +K+ F+ GS +K +L+ + SM+P+ERA  LE ++ +   H  SA EGQT+APSIDEKVDLHFIA V  DG LYELDGRKPFPINHG+TS +TLLED   VCKKFMERDP    FN IAL+
Sbjct:    1 MEGQRWLPLEANPEVTNQFLKQLGLHPN-WQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
The following BLAST results are available for this feature:
BLAST of TCONS_00073482-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UCHL35.123e-10361.14Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
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