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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073482-protein ID=TCONS_00073482-protein|Name=TCONS_00073482-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MSKPRWLPLESNPDVMNKYTENLGVDMSVLAYSDVYGFEPDLLMMVPRPV
VSLVLLFPITENYENFRKEEEEKITKEGQTVSDNVYFTKQTVGNACGTVG
IIHAIANNVEKLTFKDGSVVKDYLDSTKSMTPDERAVALEKHEGVTRCHG
DSAQEGQTKAPSIDEKVDLHFIAFVEKDGFLYELDGRKPFPINHGKTSAD
TLLEDTAVVCKKFMERDPGNYNFNMIALAQKAF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001578 | Peptidase_C12_UCH |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
| cellular_component |
GO:0005622 |
intracellular |
| molecular_function |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001578 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase | PRINTS | PR00707 | UBCTHYDRLASE | coord: 46..58
score: 64.84
coord: 165..176
score: 57.14
coord: 90..107
score: 66.67
coord: 8..25
score: 53.17
coord: 181..191
score: 80.52 |
| IPR001578 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase | GENE3D | 3.40.532.10 | | coord: 1..231
e-value: 3.0E-76
score: 255.3 |
| IPR001578 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase | PFAM | PF01088 | Peptidase_C12 | coord: 6..214
e-value: 2.8E-61
score: 206.9 |
| IPR001578 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase | PROSITE | PS00140 | UCH_1 | coord: 90..106 |
| None | No IPR available | CDD | cd09616 | Peptidase_C12_UCH_L1_L3 | coord: 6..228
e-value: 1.2967E-117
score: 336.53 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 4..230 |
Blast
BLAST of TCONS_00073482-protein vs. Swiss-Prot (Human)
Match: UCHL3 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 5.123e-103 Identity = 140/229 (61.14%), Postives = 175/229 (76.42%), Query Frame = 0 Query: 1 MSKPRWLPLESNPDVMNKYTENLGVDMSVLAYSDVYGFEPDLLMMVPRPVVSLVLLFPITENYENFRKEEEEKITKEGQTVSDNVYFTKQTVGNACGTVGIIHAIANNVEKLTFKDGSVVKDYLDSTKSMTPDERAVALEKHEGVTRCHGDSAQEGQTKAPSIDEKVDLHFIAFVEKDGFLYELDGRKPFPINHGKTSADTLLEDTAVVCKKFMERDPGNYNFNMIALA 229
M RWLPLE+NP+V N++ + LG+ + + DVYG +P+LL MVPRPV +++LLFPITE YE FR EEEEKI +GQ V+ +VYF KQT+ NACGT+G+IHAIANN +K+ F+ GS +K +L+ + SM+P+ERA LE ++ + H SA EGQT+APSIDEKVDLHFIA V DG LYELDGRKPFPINHG+TS +TLLED VCKKFMERDP FN IAL+
Sbjct: 1 MEGQRWLPLEANPEVTNQFLKQLGLHPN-WQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
The following BLAST results are available for this feature:
BLAST of TCONS_00073482-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| UCHL3 | 5.123e-103 | 61.14 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... | [more] |
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