TCONS_00073437-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073437-protein
Unique NameTCONS_00073437-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073437-protein ID=TCONS_00073437-protein|Name=TCONS_00073437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MAFSITSHPAHVGLKVSADPVQTPTFLQGSKGESKRTLQPITTGTSVLGV
KFDGGVALAGDMLGSYGSLARYPGVSRLIQVDDKTVVFASGDYADYQYLK
EELQRMSIENDIEDDGHSYSSKSIFAYLRLLMYYRRNKFNPIWNTLAVGG
YSNGKPFLGYVDKIGSAYEENAIATGYGAYIARPLIEKAIEEKGGKLTKI
EAVKVLIECLKILYYRDARSINKFEIAVITEEGVNIESNMTADTNWEIAH
YVKGYE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045581XLOC_045581Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073437TCONS_00073437Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR016295Proteasome_endopept_cplx_B
IPR029055Ntn_hydrolases_N
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 42..229
e-value: 1.7E-32
score: 112.3
IPR016295Proteasome endopeptidase complex, beta subunitPIRSFPIRSF001213MCPcoord: 10..256
e-value: 3.3E-89
score: 296.4
IPR016295Proteasome endopeptidase complex, beta subunitCDDcd03760proteasome_beta_type_4coord: 43..237
e-value: 6.61791E-100
score: 291.782
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 45..252
e-value: 1.9E-39
score: 134.9
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 38..252
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 48..95
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 44..229
score: 39.86

Blast
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BLAST of TCONS_00073437-protein vs. Swiss-Prot (Human)
Match: PSB4 (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4)

HSP 1 Score: 269.24 bits (687), Expect = 5.276e-91
Identity = 121/226 (53.54%), Postives = 176/226 (77.88%), Query Frame = 0 
Query:   31 KGESKRTLQPITTGTSVLGVKFDGGVALAGDMLGSYGSLARYPGVSRLIQVDDKTVVFASGDYADYQYLKEELQRMSIENDIEDDGHSYSSKSIFAYLRLLMYYRRNKFNPIWNTLAVGGYSNGKPFLGYVDKIGSAYEENAIATGYGAYIARPLIEKAIEEKGGKLTKIEAVKVLIECLKILYYRDARSINKFEIAVITEEGVNIESNMTADTNWEIAHYVKGYE 256
            +G   RT  P+ TGTSVLGVKF+GGV +A DMLGSYGSLAR+  +SR+++V++ T++ ASGDYAD+QYLK+ L +M I+ ++  DGHSYS ++I ++L   MY RR+K NP+WNT+ +GGY++G+ FLGYVD +G AYE  ++ATGYGAY+A+PL+ + + EK   L++ EA  ++  C+++LYYRDARS N+F+IA +TE+GV IE  ++ +TNW+IAH + G+E
Sbjct:   40 RGPITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVL-EKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIAHMISGFE 264
The following BLAST results are available for this feature:
BLAST of TCONS_00073437-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSB45.276e-9153.54Proteasome subunit beta type-4 OS=Homo sapiens GN=... [more]
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