TCONS_00073390-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073390-protein
Unique Name	TCONS_00073390-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	414

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073390-protein ID=TCONS_00073390-protein|Name=TCONS_00073390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MVLELQPVILAGGEGSKLFPLTDTIPKCLLPVGNKPMIWYPVQFLEKYGF
QDFMVIVRKASAEKIHEALRTHCQESSKFQMICIDDDEDIGTAEAMVLIK
DKTKTDLLVVSSDMVTDLALHRLVDTYRTYDATLCAVMAKRVDVHPQVEQ
TKSNKKSKITDPNVGTRDIVSIDPKENRLLFLSNEADLEQETISFTKSLL
KKYPKMKIQSSLVDAHLYIIKNWLLSYLAQKPKYESLKSDFIPHVIHKQF
SKPKVQSQQIQDSILEEENEGGEKTDKSAKDIFSFATADELVTMTKEWSG
YQGNCLKDPIKCYAYVSDDFCLRVNTLPAYTYINRQIVKMKDTLAPNTSY
IRLPPSVVQGGKTQIGNDCIIGDSASFGTNVTIKKSMVGKSCIIGSNVRI
TNSIIMNHVTIADG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045542	XLOC_045542	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073390	TCONS_00073390	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005835	NTP_transferase_dom
IPR001451	Hexapep
IPR029044	Nucleotide-diphossugar_trans

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016779	nucleotidyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0016779	nucleotidyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005835	Nucleotidyl transferase domain	PFAM	PF00483	NTP_transferase	coord: 7..146 e-value: 2.7E-20 score: 72.9
IPR001451	Hexapeptide repeat	PFAM	PF00132	Hexapep	coord: 363..402 e-value: 0.0017 score: 17.9
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 3..336 e-value: 4.5E-49 score: 166.7
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 6..148 coord: 308..408 coord: 207..251
None	No IPR available	GENE3D	2.160.10.10		coord: 337..414 e-value: 3.2E-11 score: 42.4
None	No IPR available	CDD	cd04198	eIF-2B_gamma_N	coord: 5..225 e-value: 8.01366E-69 score: 218.297

Blast

[Close]

BLAST of TCONS_00073390-protein vs. Swiss-Prot (Human)
Match: EI2BG (Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.665e-87
Identity = 152/420 (36.19%), Postives = 241/420 (57.38%), Query Frame = 0

Query:    3 LELQPVILAGGEGSKLFPLTDTIPKCLLPVGNKPMIWYPVQFLEKYGFQDFMVIVRKASAEKIHEALRTHCQESSKFQMICIDDDEDIGTAEAMVLIKDKTKTDLLVVSSDMVTDLALHRLVDTYRTYDATLCAVMAKRVDVHPQVEQTKSNKKSKITDPNVGTRDIVSIDPKENRLLFLSNEADLEQETISFTKSLLKKYPKMKIQSSLVDAHLYIIKNWLLSYLAQKPKYESLKSDFIPHVIHKQFSKPKVQSQQIQDSILEEENEGGEKTDKSAKDIFSF---ATADELVTMTKEWSGYQGNCLKD----PIKCYAYV-SDDFCLRVNTLPAYTYINRQIVKMKDTLAPNTSYIRLPPSVVQGGKTQIGNDCIIGDSASFGTNVTIKKSMVGKSCIIGSNVRITNSIIMNHVTIADG 414
            +E Q V++A G GS++  LT +IPK LLPVGNKP+IWYP+  LE+ GF++ +V+    +   + +AL    +   K  ++CI DD D+GTA+++  I  K KTD+LV+S D++TD+ALH +VD +R YDA+L  +M K  D    V   K  KK+      V  RD + +D    RLLF++NEADL++E +    S+L+K+P+++  + LVDAHLY +K +++ +L +     S++S+ IP+++ KQFS    Q  Q +           +K +  + DI+SF   A    L      W+  +G+  +D     ++CY ++  +  C RV+TL  Y   NRQ+ K+   L P    +     +V   K  +G D +IG     G   +IK+S++G SC+I   V ITN ++MN VT+ +G
Sbjct:    1 MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVV----TTRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDLFRAYDASLAMLMRKGQDSIEPVPGQKGKKKA------VEQRDFIGVDSTGKRLLFMANEADLDEELV-IKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDL------KKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRCYVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVS--KHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEG 401

The following BLAST results are available for this feature:

BLAST of TCONS_00073390-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073390-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
EI2BG	1.665e-87	36.19	Translation initiation factor eIF-2B subunit gamma...	[more]

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TCONS_00073390-protein (polypeptide) - C. hemisphaerica

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