TCONS_00073390-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073390-protein
Unique NameTCONS_00073390-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073390-protein ID=TCONS_00073390-protein|Name=TCONS_00073390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MVLELQPVILAGGEGSKLFPLTDTIPKCLLPVGNKPMIWYPVQFLEKYGF
QDFMVIVRKASAEKIHEALRTHCQESSKFQMICIDDDEDIGTAEAMVLIK
DKTKTDLLVVSSDMVTDLALHRLVDTYRTYDATLCAVMAKRVDVHPQVEQ
TKSNKKSKITDPNVGTRDIVSIDPKENRLLFLSNEADLEQETISFTKSLL
KKYPKMKIQSSLVDAHLYIIKNWLLSYLAQKPKYESLKSDFIPHVIHKQF
SKPKVQSQQIQDSILEEENEGGEKTDKSAKDIFSFATADELVTMTKEWSG
YQGNCLKDPIKCYAYVSDDFCLRVNTLPAYTYINRQIVKMKDTLAPNTSY
IRLPPSVVQGGKTQIGNDCIIGDSASFGTNVTIKKSMVGKSCIIGSNVRI
TNSIIMNHVTIADG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045542XLOC_045542Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073390TCONS_00073390Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005835NTP_transferase_dom
IPR001451Hexapep
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0016779 nucleotidyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005835Nucleotidyl transferase domainPFAMPF00483NTP_transferasecoord: 7..146
e-value: 2.7E-20
score: 72.9
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 363..402
e-value: 0.0017
score: 17.9
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 3..336
e-value: 4.5E-49
score: 166.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 6..148
coord: 308..408
coord: 207..251
NoneNo IPR availableGENE3D2.160.10.10coord: 337..414
e-value: 3.2E-11
score: 42.4
NoneNo IPR availableCDDcd04198eIF-2B_gamma_Ncoord: 5..225
e-value: 8.01366E-69
score: 218.297

Blast
BLAST of TCONS_00073390-protein vs. Swiss-Prot (Human)
Match: EI2BG (Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.665e-87
Identity = 152/420 (36.19%), Postives = 241/420 (57.38%), Query Frame = 0
Query:    3 LELQPVILAGGEGSKLFPLTDTIPKCLLPVGNKPMIWYPVQFLEKYGFQDFMVIVRKASAEKIHEALRTHCQESSKFQMICIDDDEDIGTAEAMVLIKDKTKTDLLVVSSDMVTDLALHRLVDTYRTYDATLCAVMAKRVDVHPQVEQTKSNKKSKITDPNVGTRDIVSIDPKENRLLFLSNEADLEQETISFTKSLLKKYPKMKIQSSLVDAHLYIIKNWLLSYLAQKPKYESLKSDFIPHVIHKQFSKPKVQSQQIQDSILEEENEGGEKTDKSAKDIFSF---ATADELVTMTKEWSGYQGNCLKD----PIKCYAYV-SDDFCLRVNTLPAYTYINRQIVKMKDTLAPNTSYIRLPPSVVQGGKTQIGNDCIIGDSASFGTNVTIKKSMVGKSCIIGSNVRITNSIIMNHVTIADG 414
            +E Q V++A G GS++  LT +IPK LLPVGNKP+IWYP+  LE+ GF++ +V+    +   + +AL    +   K  ++CI DD D+GTA+++  I  K KTD+LV+S D++TD+ALH +VD +R YDA+L  +M K  D    V   K  KK+      V  RD + +D    RLLF++NEADL++E +    S+L+K+P+++  + LVDAHLY +K +++ +L +     S++S+ IP+++ KQFS    Q  Q +           +K +  + DI+SF   A    L      W+  +G+  +D     ++CY ++  +  C RV+TL  Y   NRQ+ K+   L P    +     +V   K  +G D +IG     G   +IK+S++G SC+I   V ITN ++MN VT+ +G
Sbjct:    1 MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVV----TTRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDLFRAYDASLAMLMRKGQDSIEPVPGQKGKKKA------VEQRDFIGVDSTGKRLLFMANEADLDEELV-IKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDL------KKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRCYVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVS--KHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEG 401          
The following BLAST results are available for this feature:
BLAST of TCONS_00073390-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EI2BG1.665e-8736.19Translation initiation factor eIF-2B subunit gamma... [more]
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