MAPK binding protein (polypeptide) - C. hemisphaerica

Overview


Name	MAPK binding protein
Unique Name	TCONS_00073358-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	718

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073358-protein ID=TCONS_00073358-protein|Name=MAPK binding protein|organism=Clytia hemisphaerica|type=polypeptide|length=718bp
MESEERNFPIIIKRRLSMRKSGASGNKITPNRKLIRKSASRQDLRGLNDK
VTLKHILGLTTTNTNGLASNPTSGIIAYPAGCVIVLYNTKTNIQKHILNP
DKKTITCVSFSPDGRYLVSGESGQQPSVRVWDLNENLSQVAELRGHKSGI
NAVEFSPNNKLLVSIGDQHDMLVNVWNWKLGHTVACNKSGCRVRSVSFSE
SGNYLVTVGNRHVKFWYLDQEAISKGNAPITPITGRAGILGDQRNNCFTD
VKCGRGKNSAFTYCVTKSSLLCMFNERRIMDKWVELKAGSANCLEVTENY
IFCGCSNGLIRVFDPTSLRFVASFPRPHNLGVNVSEGLQPTDLVHVSNKS
CPDLVAITLDSEHFKMTSIYNDHSLYVWDLKNIKKVGKVASFLYHSACIW
GVETYPYFDDSPSACLPYGSFLTCSSDDTIRIWNIETGNTQVKMYPRNLY
SKELLKIVYIDEDLSNIQDTSMAPFGKDTDGKNGVRCMQISPDGQILATG
DRSGNLRIYSLDFFDETFRIEAHESEILCVEFSPEESGYKLLASSSRDRL
IHIFDVMKKYTLLQTIDDHSSSITAVRFNYDENILQLLSCGADKVVMFHT
AQTNENGVCFVRNTIVPGKATLYDMGIEPTRKYAATVGQDRNMRVYNVQE
AKQTTCFKGSLSDEGNLIKFQLDGGGVYAAISCSDKTIGIFDFVNGECEA
SMHGHSGKTTSVVYIFYI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045516	XLOC_045516	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073358	TCONS_00073358	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR011047	Quinoprotein_ADH-like_supfam

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 340..379 e-value: 390.0 score: 0.6 coord: 385..434 e-value: 1.7 score: 15.5 coord: 277..314 e-value: 85.0 score: 4.8 coord: 513..555 e-value: 2.8E-4 score: 30.2 coord: 608..647 e-value: 58.0 score: 5.9 coord: 136..177 e-value: 5.2E-4 score: 29.3 coord: 183..217 e-value: 3.0 score: 14.0 coord: 91..132 e-value: 1.2E-4 score: 31.5 coord: 559..600 e-value: 0.017 score: 24.3 coord: 654..692 e-value: 150.0 score: 3.2 coord: 471..510 e-value: 0.0051 score: 26.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 482..509 e-value: 0.012 score: 16.3 coord: 139..177 e-value: 2.0E-4 score: 22.0 coord: 521..555 e-value: 0.22 score: 12.3 coord: 100..132 e-value: 2.4E-6 score: 28.0 coord: 181..216 e-value: 0.015 score: 16.1 coord: 562..597 e-value: 0.21 score: 12.4 coord: 399..434 e-value: 0.011 score: 16.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 421..443 score: 9.339
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 520..564 score: 9.272
None	No IPR available	GENE3D	2.40.50.140		coord: 355..427 e-value: 1.3E-6 score: 27.4
None	No IPR available	GENE3D	2.80.10.50		coord: 153..179 e-value: 7.4E-7 score: 28.8
None	No IPR available	GENE3D	1.10.10.670		coord: 180..231 e-value: 3.5E-5 score: 23.1 coord: 525..549 e-value: 4.6E-4 score: 19.5
None	No IPR available	GENE3D	2.140.10.30		coord: 47..152 e-value: 2.1E-20 score: 72.5
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 428..524 e-value: 2.1E-15 score: 56.2
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 245..336 e-value: 0.0027 score: 16.4
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 550..715 e-value: 3.9E-21 score: 74.7
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 366..380
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 478..718 score: 17.851
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 98..186 score: 11.26
IPR017986	WD40-repeat-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 611..714
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 678..709 coord: 81..203 coord: 300..325 coord: 375..583

Blast

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BLAST of MAPK binding protein vs. Swiss-Prot (Human)
Match: MABP1 (Mitogen-activated protein kinase-binding protein 1 OS=Homo sapiens GN=MAPKBP1 PE=1 SV=4)

HSP 1 Score: 741.11 bits (1912), Expect = 0.000e+0
Identity = 354/700 (50.57%), Postives = 489/700 (69.86%), Query Frame = 0

Query:   29 TPNRKLIRKSAS--RQDLRGLNDKVTLKHILGLTTTNTNGLASNPTSGIIAYPAGCVIVLYNTKTNIQKHILNPDKKTITCVSFSPDGRYLVSGESGQQPSVRVWDLNENLSQVAELRGHKSGINAVEFSPNNKLLVSIGDQHDMLVNVWNWKLGHTVACNKSGCRVRSVSFSESGNYLVTVGNRHVKFWYLDQEAISKGNAPITPITGRAGILGDQRNNCFTDVKCGRGKNSAFTYCVTKSSLLCMFNERRIMDKWVELK------AGSANCLEVTENYIFCGCSNGLIRVFDPTSLRFVASFPRPHNLGVNVSEGLQPTDLVH-VSNKSCPDLVAITLDSEHFKMTSIYNDHSLYVWDLKNIKKVGKVASFLYHSACIWGVETYPYFDDSPSACLPYGSFLTCSSDDTIRIWNIETGNTQVKMYPRNLYSKELLKIVYIDEDLSNIQDTSMAPFGKDTDG-----KNGVRCMQISPDGQILATGDRSGNLRIYSLDFFDETFRIEAHESEILCVEFSPEESGYKLLASSSRDRLIHIFDVMKKYTLLQTIDDHSSSITAVRFNYDENILQLLSCGADKVVMFHTAQTNENGVCFVRNTIVPGKATLYDMGIEPTRKYAATVGQDRNMRVYNVQEAKQTTCFKGSLSDEGNLIKFQLDGGGVYAAISCSDKTIGIFDFVNGECEASMHGHSGKTTSVVY 714
            +P+ KL R  A   R+DL   + KVTL+ +LG+T +   GLA +P SG++AYPAGCV+VL+N + + Q HILN  +KTIT ++FSPDG+YLV+GESG  P+VRVWD+ E+ SQVAEL+ HK G+  V FSP+ K +VS+G QHDM+VNVW WK    VA NK   RV +VSFSE  +Y VT GNRH+KFWYLD    SK NA + P+ GR+G+LG+ RNN FTDV CGRGK +  T+C+T S LLC F++RR++DKWVEL+         A+C+ V+++YIFCGC++G +R+F+P++L F+++ PRPH LG +++   + + L   V+N   PD +A+T D  +  ++ +YNDHS+YVWD+++ KKVGKV S LYHS+C+W VE YP   DS  ACLP  SF+TCSSD+TIR+WN E+         RN+ S +L+KI+Y+D +   + DT + P G   D      + G+R + +SP+GQ LA+GDR G LR++ L    E  ++EAH+SEILC+E+S  ++G KLLAS+SRDRLIH+ D  ++Y+L QT+D+HSSSITAV+F   +  ++++SCGADK + F TAQ + +GV F R   V  K TLYDM +EP+ KY A   QDRN+R++N+   KQ   FKGS  ++G LIK Q D  G+Y A SCSDK + IFDF +GEC A+M GHS   T + +
Sbjct:   18 SPSIKLRRSKAGNRREDL---SSKVTLEKVLGITVSGGRGLACDPRSGLVAYPAGCVVVLFNPRKHKQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAEH-SQVAELQEHKYGVACVAFSPSAKYIVSVGYQHDMIVNVWAWKKNIVVASNKVSSRVTAVSFSEDCSYFVTAGNRHIKFWYLDDSKTSKVNATV-PLLGRSGLLGELRNNLFTDVACGRGKKADSTFCITSSGLLCEFSDRRLLDKWVELRNIDSFTTTVAHCISVSQDYIFCGCADGTVRLFNPSNLHFLSTLPRPHALGTDIASVTEASRLFSGVANARYPDTIALTFDPTNQWLSCVYNDHSIYVWDVRDPKKVGKVYSALYHSSCVWSVEVYPEVKDSNQACLPPSSFITCSSDNTIRLWNTESSGVHGSTLHRNILSSDLIKIIYVDGNTQALLDTEL-PGGDKADASLLDPRVGIRSVCVSPNGQHLASGDRMGTLRVHELQSLSEMLKVEAHDSEILCLEYSKPDTGLKLLASASRDRLIHVLDAGREYSLQQTLDEHSSSITAVKFAASDGQVRMISCGADKSIYFRTAQKSGDGVQFTRTHHVVRKTTLYDMDVEPSWKYTAIGCQDRNIRIFNISSGKQKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIFDFSSGECVATMFGHSEIVTGMKF 711

The following BLAST results are available for this feature:

BLAST of MAPK binding protein vs. Swiss-Prot (Human)

BLAST of MAPK binding protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
MABP1	0.000e+0	50.57	Mitogen-activated protein kinase-binding protein 1...	[more]

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MAPK binding protein (polypeptide) - C. hemisphaerica

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