TCONS_00073320-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073320-protein
Unique Name	TCONS_00073320-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073320-protein ID=TCONS_00073320-protein|Name=TCONS_00073320-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
FRPFGWNWWKYLFLLGFSITGAVSVKYAGVLSIIVIGALIGYELWLLVGD
ITVPVKSVYKHITARFIFLIVMPIVLYIGQFYIMLSVLQKTGLHDGLMSS
SFQKTLEGGLESITKNQAQIISYGSHITLRNTHSKQCWLHSHKHLYPVKY
EDGRGSSAQQQVTCYAFKDINNWFIVKHPDSDSLKVDFPPRPVKNGDVIH
LVHGLTGRGISSHDVGAPVNPTLMEISGYVDHNVSMDAQYGWKLQIVNPD
ESELWRAIGSQVRFVHVNTSAAIKVSGSTLPEWGFRQYEVGTDRRINTQE
SIWNVEEHNQNVTKPEDMSDEEAKRVLSEHAERYQVSGKTHAMSFFQKFL
EYQIKMFKVNNDLTNGHAFASKPMHWPLMLKGVAYWLDTYTNKQIFIIGN
PIVYWLGAISLLIYMALLALYLLRRKRQCYDLDNAEWNNFSIGCYLLIGG
FLLNWLPYFPVERTLFLHNYLPALIFKIILIPMLMDHVHSVWFKNFPILQ
YGVKAASVLIVGLVVFVFQYFSAFTYGVTALSQRDIEQKRWLSSWRFMIH
R

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045486	XLOC_045486	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073320	TCONS_00073320	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016093	MIR_motif
IPR003342	Glyco_trans_39/83
IPR032421	PMT_4TMC

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0000030	mannosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006493	protein O-linked glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006493	protein O-linked glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0000030	mannosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016093	MIR motif	SMART	SM00472	mir_2	coord: 253..308 e-value: 8.9E-4 score: 28.6 coord: 190..247 e-value: 2.9 score: 12.3 coord: 118..179 e-value: 1.5E-11 score: 54.4
IPR016093	MIR motif	PFAM	PF02815	MIR	coord: 139..303 e-value: 3.7E-11 score: 43.1
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 253..308 score: 9.851
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 190..247 score: 9.679
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 118..178 score: 10.389
IPR016093	MIR motif	SUPERFAMILY	82109	MIR domain	coord: 120..306
None	No IPR available	GENE3D	2.80.10.50		coord: 115..318 e-value: 1.0E-46 score: 158.1
IPR003342	Glycosyl transferase family 39/83	PFAM	PF02366	PMT	coord: 2..87 e-value: 1.2E-14 score: 54.4
IPR032421	Protein O-mannosyl-transferase, C-terminal four TM domain	PFAM	PF16192	PMT_4TMC	coord: 345..545 e-value: 1.2E-55 score: 188.1

Blast

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BLAST of TCONS_00073320-protein vs. Swiss-Prot (Human)
Match: POMT1 (Protein O-mannosyl-transferase 1 OS=Homo sapiens GN=POMT1 PE=1 SV=3)

HSP 1 Score: 427.557 bits (1098), Expect = 6.132e-142
Identity = 227/577 (39.34%), Postives = 352/577 (61.01%), Query Frame = 0

Query:    3 PFGWNWWKYLFLLGFSITGAVSVKYAGVLSIIVIGALIGYELWLLVGDITV------------PVK----------SVYKHITARFIFLIVMPIVLYIGQFYIMLSVLQKTGLHDGLMSSSFQKTLEGGLESITKNQAQIISYGSHITLRNTHSKQ--CWLHSHKHLYPVKYEDGRGSSAQQQVTCYAFKDINNWFIVKHPDSDSLKVDFPPRPVKNGDVIHLVHGLTGRGISSHDVGAPVNPTLMEISGYVDHNVSMDAQYGWKLQIVNP-DESELWRAIGSQVRFVHVNTSAAIKVSGSTLPEWGFRQYEVGTDR--RINTQESIWNVEEHNQNVTKPEDMSDEEAKRVLSEHAERYQVSGKTHAMSFFQKFLEYQIKMFKVNNDLTNGHAFASKPMHWPLMLKGVAYWLDTYTNKQIFIIGNPIVYWLGAISLLIYMALLALYLLRRKRQCYDLDNAEWNNFSIGCYLLIGGFLLNWLPYFPVERTLFLHNYLPALIFKIILIPMLMDHVHSVWFKNFPILQYGVKAASVLI-VGLVVFVFQYFSAFTYGVTALSQRDIEQKRWLSSWRFMIHR 551
            PF  +WW +L L G + + AV +KY GV + +++  +     W L+GD T+            P             V+ H+ AR + L+V+P+VLY+  FY+ L ++ ++G HD +MSS+FQ +LEGGL  IT+ Q   +++GS +TLRN   K   CWLHSH+  YP+ YE+GRGSS QQQVTCY FKD+NNW+IVK P    L V  PPRPV++GD++ LVHG+T R +++HDV AP++P   E+S Y+D+N+SM AQ  W+L+IVN   ++++W+ I S+VRFVHVNTSA +K+SG+ LP+WG+RQ E+  ++  R     ++WNVEEH    ++ +     E +R L   A+       +  +SF  +F E Q +M  + +D  + H ++S P+ W  +   +AYWL   T+ QI ++GN +++  G+++L IY  L   YLLRR+R  +DL    W  + +   L  GG+ +N+LP+F +E+TLFL++YLPAL F+I+L+P+++ H+     ++   LQ  + +A V+        V       TYG  +LS  +++  RW  SW  +I +
Sbjct:  181 PFSLSWWFWLTLTGVACSCAVGIKYMGVFTYVLVLGVAAVHAWHLLGDQTLSNVGADVQCCMRPACMGQMQMSQGVCVFCHLLARAVALLVIPVVLYLLFFYVHLILVFRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAFGSQVTLRNVFGKPVPCWLHSHQDTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPRRHQLVVSSPPRPVRHGDMVQLVHGMTTRSLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWRLEIVNRGSDTDVWKTILSEVRFVHVNTSAVLKLSGAHLPDWGYRQLEIVGEKLSRGYHGSTVWNVEEHRYGASQEQ----RERERELHSPAQ----VDVSRNLSFMARFSELQWRMLALRSD-DSEHKYSSSPLEWVTLDTNIAYWLHPRTSAQIHLLGNIVIWVSGSLALAIYALLSLWYLLRRRRNVHDLPQDAWLRWVLAGALCAGGWAVNYLPFFLMEKTLFLYHYLPALTFQILLLPVVLQHISDHLCRS--QLQRSIFSALVVAWYSSACHVSNTLRPLTYGDKSLSPHELKALRWKDSWDILIRK 746

The following BLAST results are available for this feature:

BLAST of TCONS_00073320-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073320-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
POMT1	6.132e-142	39.34	Protein O-mannosyl-transferase 1 OS=Homo sapiens G...	[more]

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TCONS_00073320-protein (polypeptide) - C. hemisphaerica

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