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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073312-protein ID=TCONS_00073312-protein|Name=TCONS_00073312-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MYSSTKDVTPLMDLNKDSKLDMPSKNEDEFLKNPFRQNFKSNEFWKKVNS
LHTKGGKSWDDALTTVQVEVFTATCGNDDPMISLLEQVYDKFIVLEKVKN
DQRSRSGFINQVTRLGAKLLELDKERATQQNEEEEEEEEEEEEEEDLGPV
YKKSFFYIENKPTLLHMLASRDLFDLCEIYLNDYYPEHLYSLDNPTILPN
DPDKDTKFRKMPFEYAYAKHFDQTAAFLAGKMDEFRVRKLFQKNQNKILQ
CSLAEVINHNMKETAIKVLDCCINPDWPFVPTEIGVDNDESWSRLKEDPR
SYHFYYDLLDSDQKGNAPKKPQEGMDKRDRFDHLQSSPLQVLINNEVTKK
AAVSHPTVVMLVDRKWNTFGKRRIFMFMALYLFFLLMLALGLFGSENWGN
EVDMVIKMIVVIFNILYTFEEVDQMFKEGRGYFCDWFNAFDFLGIATIYV
LIPLYAFGEYKAFYGVASASFILNFMRAFKFFSAFEKLGPYAKVFFDLLK
KDIWVFLQLFIVLMVAFTGSVFLALKSEKSDGGKIIDGKNDTLTFWSTML
REARALAEGKEFADDYDGVYSAPLVMFLLLNMAAIIVVLSNMLIGQISAR
YEKAAENARVESAIARAKYICKIEKSRFLCGNLRIKYYEKADYVTDDAKV
KEILTDWHELKKDTESTREAIKKLQEKMKASK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005821 | Ion_trans_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005216 | ion channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006811 | ion transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006811 |
ion transport |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005216 |
ion channel activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 117..147 |
| None | No IPR available | GENE3D | 1.20.120.350 | | coord: 116..486
e-value: 1.6E-9
score: 36.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 125..147 |
| IPR005821 | Ion transport domain | PFAM | PF00520 | Ion_trans | coord: 376..607
e-value: 7.0E-13
score: 48.3 |
Blast
The following BLAST results are available for this feature:
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