TCONS_00073310-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073310-protein
Unique NameTCONS_00073310-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073310-protein ID=TCONS_00073310-protein|Name=TCONS_00073310-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MLFTLKELEKWLQVTIFEITIACASALVFSLLLALKLENVLDASWWTIFT
PLYACDTLIAYFDLIVFIHLYKANERQMAVKRIMINTTIILLLIIYKVLL
CQQLEGIKQMRYSTIHSPLFILFFILLVRSCIVSANT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045479XLOC_045479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073310TCONS_00073310Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019396TM_Fragile-X-F-assoc
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019396Transmembrane Fragile-X-F-associated proteinPFAMPF10269Tmemb_185Acoord: 35..129
e-value: 2.0E-9
score: 37.5

Blast
[Close]
BLAST of TCONS_00073310-protein vs. Swiss-Prot (Human)
Match: TM203 (Transmembrane protein 203 OS=Homo sapiens GN=TMEM203 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.284e-30
Identity = 55/136 (40.44%), Postives = 91/136 (66.91%), Query Frame = 0 
Query:    1 MLFTLKELEKWLQVTIFEITIACASALVFSLLLALKLENVLDA-SWWTIFTPLYACDTLIAYFDLIVFIHLYKANERQMAVKRIMINTTIILLLIIYKVLLCQQL-EGIKQMRYSTIHSPLFILFFILLVRSCIVS 134
            MLF+L+EL +WL    FEI +   + LVFS+LLAL+++ ++   SWW +F P +A D L  YF  IV + L++  E+++AV R+    T++ L  ++++LLCQ+L E  +++ +  I SPLFIL  +L++R+C V+
Sbjct:    1 MLFSLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFFAADGLSTYFTTIVSVRLFQDGEKRLAVLRLFWVLTVLSLKFVFEMLLCQKLAEQTRELWFGLITSPLFILLQLLMIRACRVN 136
The following BLAST results are available for this feature:
BLAST of TCONS_00073310-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM2031.284e-3040.44Transmembrane protein 203 OS=Homo sapiens GN=TMEM2... [more]
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