TCONS_00073199-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073199-protein
Unique NameTCONS_00073199-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length391

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073199-protein ID=TCONS_00073199-protein|Name=TCONS_00073199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
MASKEDLVKSIIIKQNSGESSSKSETNAKSQTEETTTVEVIVSKTSATEG
SSETGQEYVYWARRGENELETAGEVEVSSSGVEQENVNPEECGELLLVRE
TEANGAQISSVRDPNSLVYGLQVAAEQITAAHEIQTAGEAAEAFGQITEE
FIEQQQRLEAKREAAKLQEKLMNEEYQKAIGYLLCSSKSKSGKQKKKQTM
TAYLFFCRRYRAKIVARNPKLSFAQISKLLSHMWRNASEQEKNTYRLKLE
QHRTKVNAIVEKNMIEKMKMVKQQKLMEEIQRRSDEEHPLIATSSAELHD
YEVVQQHQQEDSEDVHQEEIPVEEEEESQEESQLSIIESLEKESVAAAAE
ITQTTDDGEQEEETVEQNEEPEISHAVIDPQTKMMLLEGES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045406XLOC_045406Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073199TCONS_00073199Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..177
NoneNo IPR availableCOILSCoilCoilcoord: 235..255
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableCDDcd00084HMG-boxcoord: 200..253
e-value: 1.65878E-11
score: 58.3991
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 195..265
e-value: 6.9E-11
score: 52.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 197..257
e-value: 2.9E-14
score: 53.1
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 198..256
e-value: 2.4E-15
score: 56.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 196..264
score: 12.956
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 187..254

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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