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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073131-protein ID=TCONS_00073131-protein|Name=TCONS_00073131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
QELDGIYFRGHKMNIHASSAHEFNSHFPNTPMTKNIGQEWKLYGRPKEGD
LKFESEHYETRKINRGGATGYDQYYESNFKAESSYPYTTQSRFEERGAYS
AKAEYQDYAASYNTYQNEALPKRDVAFQKDMHFQRKDMQYPTGSYQQYAK
MESFPTKHFVDTEISKTTYAYPPKKDTSNRREPNKKRDLSKSHSKKDEDK
RHRHRSRSPTSRSKYSQSKSSSSSSSKDDINVKRFVRIFGMGSACQESDF
KNFLKPLEVSRVYLLRFKSGDNAGKSNGSAIVKLGSEKDLIKALRCDGNN
YEGLPMQVVRSAKEDIIDAIEEDKKHPKLKADLSMLNDLANTNPQIQHLV
GLLNEAVSNATSSKSSPTGRNDKPKPTQTSAPRRHSGGSSYSASSHTARP
KNPPPRAQQKEDPVINRVASSANINVADIKSGRVVGMRNLPMNINTDLIL
NFFYGYDRIDESVRIHYLDNNQCSGDAIIAFRTNEEARRAVKNLNKKMIK
GGKKVELFFL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000504 | RRM_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000504 | RNA recognition motif domain | SMART | SM00360 | rrm1_1 | coord: 434..508
e-value: 9.0E-7
score: 38.5
coord: 235..309
e-value: 0.26
score: 11.7 |
| IPR000504 | RNA recognition motif domain | PFAM | PF00076 | RRM_1 | coord: 437..501
e-value: 2.6E-9
score: 36.7 |
| IPR000504 | RNA recognition motif domain | PROSITE | PS50102 | RRM | coord: 433..510
score: 10.497 |
| IPR000504 | RNA recognition motif domain | SUPERFAMILY | 54928 | RNA-binding domain, RBD | coord: 236..323
coord: 430..502 |
| None | No IPR available | GENE3D | 3.30.70.330 | | coord: 420..508
e-value: 7.7E-10
score: 38.4 |
| None | No IPR available | GENE3D | 3.30.70.330 | | coord: 170..326
e-value: 3.1E-10
score: 39.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 169..227 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 358..414 |
| None | No IPR available | CDD | cd12254 | RRM_hnRNPH_ESRPs_RBM12_like | coord: 434..508
e-value: 2.05283E-18
score: 79.1383 |
Blast
The following BLAST results are available for this feature:
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