TCONS_00073071-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073071-protein
Unique NameTCONS_00073071-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073071-protein ID=TCONS_00073071-protein|Name=TCONS_00073071-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MNCNILRKVTLSTRMMSTVSKRLEGKVAIVTASTAGIGYAIAEGLAENGA
KVVISSRKEKNVEEALQQLKSKDLEVSGCVCHVAKEGDRTKLLEEALKQY
GQLDILVNNAGISPAFGPLLKTTSEQWDKIFTTNVKAGFQMTQEAMPHLN
KTKGSVLFNSSITGYVPFPMIGAYSISKTALLGLIKALATECGPTGVRVN
GIAPGIIETNLSEMLTTTDSISQTILSNTPLGRFGKPSEVAGLAVFLSSD
EASYITGETIMVTGGVHSRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045299XLOC_045299Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073071TCONS_00073071Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 101..112
score: 65.99
coord: 174..193
score: 37.99
coord: 148..164
score: 28.31
coord: 230..250
score: 43.56
coord: 195..212
score: 43.01
coord: 27..44
score: 45.21
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 101..112
score: 61.24
coord: 174..193
score: 34.98
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 35..267
e-value: 3.0E-67
score: 226.5
NoneNo IPR availableGENE3D3.40.50.720coord: 18..65
e-value: 2.4E-11
score: 42.7
coord: 66..269
e-value: 2.7E-63
score: 213.2
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 161..189
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 24..267

Blast
[Close]
BLAST of TCONS_00073071-protein vs. Swiss-Prot (Human)
Match: DHRS4 (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 1.414e-77
Identity = 125/263 (47.53%), Postives = 175/263 (66.54%), Query Frame = 0 
Query:   12 STRMMST-VSKR--LEGKVAIVTASTAGIGYAIAEGLAENGAKVVISSRKEKNVEEALQQLKSKDLEVSGCVCHVAKEGDRTKLLEEALKQYGQLDILVNNAGISPAFGPLLKTTSEQWDKIFTTNVKAGFQMTQEAMPHLNKT-KGSVLFNSSITGYVPFPMIGAYSISKTALLGLIKALATECGPTGVRVNGIAPGIIETNLSEMLTTTDSISQTILSNTPLGRFGKPSEVAGLAVFLSSDEASYITGETIMVTGGVHSRL 270
            S RM S+ +++R  L  KVA+VTAST GIG+AIA  LA++GA VV+SSRK++NV++A+  L+ + L V+G VCHV K  DR +L+  A+K +G +DILV+NA ++P FG ++  T E WDK    NVKA   MT+  +P + K   GSV+  SSI  + P P    Y++SKTALLGL K LA E  P  +RVN +APG+I+T+ S ML       +++     + R G+P + AG+  FL S++ASYITGET++V GG  SRL
Sbjct:   16 SVRMASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPSRL 278
The following BLAST results are available for this feature:
BLAST of TCONS_00073071-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHRS41.414e-7747.53Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
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