TCONS_00072897-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072897-protein
Unique NameTCONS_00072897-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length811

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072897-protein ID=TCONS_00072897-protein|Name=TCONS_00072897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=811bp
MLLARKFLKTTSLLKAKRLYSVKNVPSSAEIVIAGGGIIGTSIAYHLAEL
GWKDIVILEQGSPGCGTSWHAAGLVGSLKSTKVELQNVLYAQKLFEKFEQ
DHGVGFKKCGSLSLAQTDERAKALKRMETMINSFGGECHLISPEEAGKLN
PYINIDDIKLAFFVPNDGVVNPTDVVNAYLKGAMNNGSTKLLEGVQVQKI
KCDGRRVTNIETDHGNIKCDYFINSAGLWARELGQKSDIQVQVPLHACEH
FYIVTKPCNVDTMMPVTRDYDSFAYMREWSGGLMAGGFEPNPLPCFHDKI
PEKFEFQLLDENWDQFMPLMEGISNRFPLMKTAEIRTFLNGPESFTPDYR
PYFSRSMELENYYIAAGMTSYGIAFSAGVGRTLAELITHGEASNFDFYTS
DIRRIAPGTNNKRICRTGARDTLENAYLLQYPDKCHLSSRNILTSSIHNL
LTKQGAVWTKENAWEIPTFFKEANQDEFPGSFGRPLWLQNVQNEIKTAKT
TMGIVDLSSQSVFQLTDIGNNSMAHLMNVILPGKFTGEWKNGQTSISTPI
VNQNGRCVAMVTINKSSNNSILISTDAFNHNTLYTFLQGLLNSDKQSNQI
ILQDMTSAYSCFGLVGPNTMELLKDLIPPPDNEDIETLKGCKLIDIGYAS
NVIIYPGQLGEGFNLLIPTNQCQGLYQEIMDENEKYGIRNIGHYAWNSLR
VQKRILKVPNEIGMNTSVDLVEQFSFEKELSNIKLMKIKISSDEIWPMNG
DEVLHQSTQTVIGHITSIGYNEDDHNEIFALASFSSGFEDGNTEKAFIRT
GAGNFDAKVIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045231XLOC_045231Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072897TCONS_00072897Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR006076FAD-dep_OxRdtase
IPR006222GCV_T_N
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 4..102
e-value: 2.6E-4
score: 20.4
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 347..432
coord: 30..243
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 31..386
e-value: 4.6E-57
score: 194.1
IPR006222Glycine cleavage T-protein-like, N-terminalPFAMPF01571GCV_Tcoord: 448..715
e-value: 4.1E-29
score: 101.6
NoneNo IPR availableGENE3D3.30.9.10coord: 108..188
e-value: 1.8E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.1360.120coord: 594..702
e-value: 1.2E-8
score: 34.5
coord: 441..534
e-value: 3.9E-4
score: 19.8
NoneNo IPR availableGENE3D3.30.9.10coord: 189..346
e-value: 1.4E-30
score: 105.6
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 440..715
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 245..346

Blast
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BLAST of TCONS_00072897-protein vs. Swiss-Prot (Human)
Match: PDPR (Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial OS=Homo sapiens GN=PDPR PE=1 SV=2)

HSP 1 Score: 417.542 bits (1072), Expect = 4.090e-133
Identity = 239/722 (33.10%), Postives = 391/722 (54.16%), Query Frame = 0 
Query:   25 VPSSAEIVIAGGGIIGTSIAYHLAELGWKDIVILEQGSPGCGTSWHAAGLVGSLKSTKVELQNVLYAQKLFEKFEQDHGV--GFKKCGSLSLAQTDERAKALKRMETMINSFGGECHLISPEEAGKLNPYINIDDIKLAFFVPNDGVVNPTDVVNAYLKGAMNNGSTKLLEGVQVQKIKCDGRRVTNIETDHGNIKCDYFINSAGLWARELGQKSDIQVQVPLHACEHFYIVTKPCN--VDTMMPVTRDYDSFAYMREWSGGLMAGGFEPNPLPCFHDKIPEKFEFQLLDENWDQFMPLMEGISNRFPLMKTAEIRTFLNGPESFTPDYRPYFSRSMELENYYIAAGMTSYGIAFSAGVGRTLAELITHGEASNFDFYTSDIRRIAPGTNNKRICRTGARDTLENAYLLQYPDKCHLSSRNILTSSIHNLLTKQGAVWTKENAWEIPTFFKEANQD----EFPGSFGRPLWLQNVQNEIKTAKTTMGIVDLSSQSVFQLTDIGNNSMAHLMNVILPGKFTGEWKNGQTSI-STPIVNQNGRCVAMVTINKSSNNSILISTDAFNHNTLYTFLQGLLNSDKQSNQIILQDMTSAYSCFGLVGPNTMELLKDLIPPPDNEDIETLKGCKLIDIGYASNV-IIYPGQLGE-GFNLLIPTNQCQGLYQEIMDENEKYGIRNIGHYAWNSLRVQKRI---------LKVPNEIGMNTSVDLVEQFSF 726
            +P+ A++VI GGGI GTS+AYHL+++GWKDIV+LEQG    G++   AG++ + +   +E +   Y+ KL+ + EQ+ G+  G+ + GS+ LAQT +R  +LKR+   +N  G    +ISP++  +L+  +N+ D+  A  VP D VV+  DV  A    A  NG  ++ +   V  +     +VT +ETD G I+C YF+N AG WA ELG  ++  V +PLHACEHFY++T+P    + +  P   D D   Y+R W GG+++GGFE NP P F +    + E Q L E+WD F PL+  +  R P ++T EI   +N PE+FTPD R     S  ++ Y++ AGM S G++F  G G+ LAE + HG  S  + +  D++R     +++   R    + +   Y L+ P     + R + TS +++ L  QGA W +++ +E P +F   ++D    E   +F +P W   V++E+K  K  + ++D+SS + F++T  G+ ++      +L   F+ +       I  T ++N+ G      +I + +  S  + +        + +L+  +  D   + ++L+D+T  Y+   L+GP  +++L +L   P   D      CK + +GYA+ + ++     GE GF L IP      +Y E+M   +KYGIRN G+YA  SLR++K           L  P E G  + V L +   F
Sbjct:   39 LPTQAQVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLAAGSTRFCAGILSTARHLTIEQKMADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAASQNG-VQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPLETPLQSSTPTIVDADGRIYIRNWQGGILSGGFEKNPKPIFTEG-KNQLEIQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSE-NVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPDKDLLALEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALE-----VLQYLFSNDLDVPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKD---SNLLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDF 749
The following BLAST results are available for this feature:
BLAST of TCONS_00072897-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDPR4.090e-13333.10Pyruvate dehydrogenase phosphatase regulatory subu... [more]
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