TCONS_00072632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072632-protein
Unique NameTCONS_00072632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072632-protein ID=TCONS_00072632-protein|Name=TCONS_00072632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
NSPNFEPRSIIKPRPQTVQEGDDLHIYCYASAHPRPLITWEKDGVKLSDS
TKVSIDIERLTVVSVSSADWGRYSCVINGNEKYRYDAFVKVKVPLAFIEK
PETIHVKDDQTSARFKCKAIGSMPIIYHWFKNGQKLSSETDVTITSGEKG
VGSVLEIQDIDVKDEGSYQCFAFNHFESVQHSVQLVVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045083XLOC_045083Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072632TCONS_00072632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 108..177
e-value: 1.3E-4
score: 31.3
coord: 19..82
e-value: 9.5E-8
score: 41.7
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 13..94
e-value: 8.8E-8
score: 41.9
coord: 101..188
e-value: 3.1E-5
score: 33.4
NoneNo IPR availablePFAMPF13927Ig_3coord: 7..77
e-value: 3.5E-12
score: 46.6
NoneNo IPR availableCDDcd00096Igcoord: 113..184
e-value: 4.87348E-12
score: 57.1139
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..66
e-value: 7.1E-14
score: 51.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 92..188
e-value: 2.1E-18
score: 65.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 67..91
e-value: 0.29
score: 10.5
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 97..187
e-value: 1.6E-15
score: 56.9
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 7..78
score: 11.697
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 94..186
score: 10.553
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 10..101
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 88..187

Blast
[Close]
BLAST of TCONS_00072632-protein vs. Swiss-Prot (Human)
Match: PXDNL (Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 6.559e-16
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = 0 
Query:    6 EPRSIIKPRPQTVQEGDDLHIYCYASAHPRPLITWEKD-GVKLSDSTKVSIDIERLTVVSVSSADWGRYSCVINGNE-KYRYDAFVKVKVPLAFIEKPETIHVKDDQTSARFKCKAIGSMPIIYHWFKNGQKLSSETDVTITSGEKGVGSVLEIQDIDVKDEGSYQCFAFNHFESVQHSVQLVV 187
            +P  +I+P+   V  G    + C A+ HP PLITW +D G++L  S  V+     L + +++  D GR++C  N +    +  A + V+ P  F   P+   V  ++ +  + C+A G+ P +  W K G +L  E   T+ S        L I      D+G Y+C A +     + SVQL V
Sbjct:  329 KPSFVIQPQDTEVLIGTSTTLECMATGHPHPLITWTRDNGLELDGSRHVATS-SGLYLQNITQRDHGRFTCHANNSHGTVQAAANIIVQAPPQFTVTPKD-QVVLEEHAVEWLCEADGNPPPVIVWTKTGGQLPVEGQHTVLS-----SGTLRIDRAAQHDQGQYECQAVSSLGVKKVSVQLTV 505
The following BLAST results are available for this feature:
BLAST of TCONS_00072632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PXDNL6.559e-1629.35Peroxidasin-like protein OS=Homo sapiens GN=PXDNL ... [more]
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