TCONS_00072497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072497-protein
Unique NameTCONS_00072497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length546

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072497-protein ID=TCONS_00072497-protein|Name=TCONS_00072497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=546bp
MMRAPVMVLNQNTKREQGKKIQISNIDAAKTVADIIRTCLGPKAMLKMLM
DPMGGIVMTNDGNAILREIIVQHPAAKSMLEISRTQDEEVGDGTTSVVIL
AGEVMSVAAQFIEDKIHPTLIIAAYRKALDDMLEVLKDQVSIPIDVNNDE
EMLKTLQSCLGTKFLNQWSNLACTMALKAVRTCMIENNGHREIDIKRYAK
VEKVPGGTLEDSRVLDGIMLNKDVVHPRMNRRIENPRILLLDCNLEFKKG
ESQTNIELSGEMDFNKILQLEEEFIKKMCNEIIAFKPDLVITEKGVSDLA
QHYLVKAGISVLRRLKKTDNNRIARAVGATIVNRPEEIKEEDLGLGCGLF
EVQKMGDEYFSFITQCKNPKACTILLRGASKDILNEVERNLQDALHVARN
VMQDPRLVPGGGAAEMAISNALEEKAKSVEGVMQWPYKAIARAMEIIPKT
LIQNCGVNSIRKLTALRAKHAEGSNTTWGIDGETGEIADMNTIGVWDCYS
VKAQTYKTAVETAMLLLRIDDIVSGTKKNTGEAAAPSVDQPPMVTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044986XLOC_044986Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072497TCONS_00072497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial
IPR012719Chap_CCT_gamma
IPR027409GroEL-like_apical_dom
IPR002194Chaperonin_TCP-1_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 384..404
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 405..525
coord: 14..144
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 144..215
coord: 369..404
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 407..419
score: 47.42
coord: 34..50
score: 37.48
coord: 56..74
score: 38.27
coord: 86..105
score: 47.98
coord: 373..395
score: 35.56
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 32..524
e-value: 1.2E-168
score: 561.7
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 368..519
e-value: 2.3E-36
score: 124.7
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 1..203
e-value: 3.3E-53
score: 179.9
IPR012719T-complex protein 1, gamma subunitTIGRFAMTIGR02344TIGR02344coord: 5..529
e-value: 1.7E-281
score: 932.2
IPR012719T-complex protein 1, gamma subunitCDDcd03337TCP1_gammacoord: 5..525
e-value: 0.0
score: 908.597
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 209..367
e-value: 3.0E-60
score: 202.7
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 211..378
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 37..49
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 86..94
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 58..74

Blast
[Close]
BLAST of TCONS_00072497-protein vs. Swiss-Prot (Human)
Match: TCPG (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4)

HSP 1 Score: 773.852 bits (1997), Expect = 0.000e+0
Identity = 356/544 (65.44%), Postives = 463/544 (85.11%), Query Frame = 0 
Query:    1 MMRAPVMVLNQNTKREQGKKIQISNIDAAKTVADIIRTCLGPKAMLKMLMDPMGGIVMTNDGNAILREIIVQHPAAKSMLEISRTQDEEVGDGTTSVVILAGEVMSVAAQFIEDKIHPTLIIAAYRKALDDMLEVLKDQVSIPIDVNNDEEMLKTLQSCLGTKFLNQWSNLACTMALKAVRTCMIENNGHREIDIKRYAKVEKVPGGTLEDSRVLDGIMLNKDVVHPRMNRRIENPRILLLDCNLEFKKGESQTNIELSGEMDFNKILQLEEEFIKKMCNEIIAFKPDLVITEKGVSDLAQHYLVKAGISVLRRLKKTDNNRIARAVGATIVNRPEEIKEEDLGLGCGLFEVQKMGDEYFSFITQCKNPKACTILLRGASKDILNEVERNLQDALHVARNVMQDPRLVPGGGAAEMAISNALEEKAKSVEGVMQWPYKAIARAMEIIPKTLIQNCGVNSIRKLTALRAKHAEGSNTTWGIDGETGEIADMNTIGVWDCYSVKAQTYKTAVETAMLLLRIDDIVSGTKK----NTGEAAAPSVDQ 540
            M   PV+VL+QNTKRE G+K+Q  NI+AAKT+ADIIRTCLGPK+M+KML+DPMGGIVMTNDGNAILREI VQHPAAKSM+EISRTQDEEVGDGTTSV+ILAGE++SVA  F+E ++HPT++I+AYRKALDDM+  LK ++SIP+D+++ + ML  + S + TK +++WS+LAC +AL AV+    E NG +EIDIK+YA+VEK+PGG +EDS VL G+M+NKDV HPRM R I+NPRI+LLD +LE+KKGESQT+IE++ E DF +ILQ+EEE+I+++C +II  KPD+VITEKG+SDLAQHYL++A I+ +RR++KTDNNRIARA GA IV+RPEE++E+D+G G GL E++K+GDEYF+FIT CK+PKACTILLRGASK+IL+EVERNLQDA+ V RNV+ DP+LVPGGGA+EMA+++AL EK+K++ GV QWPY+A+A+A+E+IP+TLIQNCG ++IR LT+LRAKH + +  TWG++GETG + DM  +G+W+  +VK QTYKTAVETA+LLLRIDDIVSG KK     + +  AP   Q
Sbjct:    2 MGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLK-KISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
The following BLAST results are available for this feature:
BLAST of TCONS_00072497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPG0.000e+065.44T-complex protein 1 subunit gamma OS=Homo sapiens ... [more]
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