TCONS_00072364-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072364-protein
Unique Name	TCONS_00072364-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	845

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072364-protein ID=TCONS_00072364-protein|Name=TCONS_00072364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=845bp
MSSTILRLRPLEYAHVLDLNSNITYVEKGPKSVILQENQKITHGPERFVI
IPPGHYCKISNPAKLPVKYGEQASLKVGLEEIRLHQEPFSLYPGEILAGG
VEKGINKLPVIPAGKALKLEALADFDDNGTIRVAGDRWQIEGPCTFYPKP
ECKRIGEVSPTIILKNSALHLKAKIDLVDKNGNHRVTGEEWMVRKLGAYL
PGVYEEIMSVVQSYVLTQNNGLYMTAERNLTDGLGKKRLAGEEWLVTSSD
SCTYIPECGEKLVRRVAITVLSKDQFCIVLDPYDNEGKQQRGKKELRKGP
LSFFLKPGETLSGGIQNIFLLQDDQALILSAVDEFVDNFGEEPIKRKPGD
VWMIKGPVVYTPPVEVEVKNLRKPIALGKNEGIYVQNEKTGEVRTVMGPQ
ACLLNQFEVLWKKELSPIVEKMLMNGGCWGDGDIRKMAYFESSVDNAYAS
GKRDKTRTVTYRVPPNSAVQVYDHRKQDSRVVFGPNLVVLEPSEEFNVLS
LSAGKPKKENALKSLAIMLGPDYITDIIEVETLDHARLKIKYAANNKFDY
ENGNFASETKLFSVPDYIGFACRNIASRIRGRVARTTFDEFHRYSTRIVK
EAVFGVDEEDNVRNALLFSENNMTVTNIDVQSIEPVDTQMRDSLLKSVQM
AIEISTQSIERAASHEARRHEQTAKGNLEKNKLQNEKAAESARMNLYELR
AETAAVESSGQAKAEAEAQAEKTLIEGHMAIEAANLKAKALEIEENSKME
ILEQQRKAEIEYMKTVNGLEIKKAKQMADIELKKSADLINAIGQDTITNI
ALAGPKAKVGLLGALGIRATLITDGKTPVNLYQAPNGAITPLGGH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044935	XLOC_044935	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072364	TCONS_00072364	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021870	MVP_shoulder
IPR002499	Vault_N
IPR018247	EF_Hand_1_Ca_BS

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 680..700
IPR021870	Major vault protein, shoulder domain	PFAM	PF11978	MVP_shoulder	coord: 520..637 e-value: 5.5E-44 score: 148.9
IPR021870	Major vault protein, shoulder domain	CDD	cd08825	MVP_shoulder	coord: 510..660 e-value: 1.24958E-78 score: 251.376
IPR002499	Major vault protein, N-terminal	PFAM	PF01505	Vault	coord: 214..256 e-value: 3.2E-10 score: 40.0 coord: 321..363 e-value: 5.4E-12 score: 45.7 coord: 110..148 e-value: 2.9E-11 score: 43.3 coord: 162..201 e-value: 1.4E-10 score: 41.2
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 2..52 score: 4.897
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 113..164 score: 12.666
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 274..322 score: 8.407
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 165..217 score: 14.22
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 323..378 score: 12.699
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 54..108 score: 6.961
IPR002499	Major vault protein, N-terminal	PROSITE	PS51224	MVP	coord: 218..272 score: 13.85
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 179..191

Blast

[Close]

BLAST of TCONS_00072364-protein vs. Swiss-Prot (Human)
Match: MVP (Major vault protein OS=Homo sapiens GN=MVP PE=1 SV=4)

HSP 1 Score: 713.761 bits (1841), Expect = 0.000e+0
Identity = 389/857 (45.39%), Postives = 558/857 (65.11%), Query Frame = 0

Query:    5 ILRLRPLEYAHVLDLNSNITYVEKGPKSVILQENQKITHGPERFVIIPPGHYCKISNPAKLPVK------YGEQASLKVGLEEIRLHQEPFSLYPGEILAGGVEKGINKLPVIPAGKALKLEALADFDD-NGTIRVAGDRWQIEGPCTFYPKPECKRIGEVSPTIILKNSALHLKAKIDLVDKNGNHRVTGEEWMVRKLGAYLPGVYEEIMSVVQSYVLTQNNGLYMTAERNLTDGLGKKRLAGEEWLVTSSDSCTYIPECGEKLVRRVAITVLSKDQFCIVLDPYDNEGKQQRGKKELRKGPLSFFLKPGETLSGGIQNIFLLQDDQALILSAVDEFVDNFGEEPIKRKPGDVWMIKGPVVYTPPVEVEVKNLRKPIALGKNEGIYVQNEKTGEVRTVMGPQACLLNQFEVLWKKELSPIVEKMLMNG----GCWGDGDIRKMAYFESSVDNAYASGKRDKTRTVTYRVPPNSAVQVYDHRKQDSRVVFGPNLVVLEPSEEFNVLSLSAGKPKKENALKSLAIMLGPDYITDIIEVETLDHARLKIKYAANNKFDYENGNFASET-KLFSVPDYIGFACRNIASRIRGRVARTTFDEFHRYSTRIVKEAVFGVDEED----------NVRNALLFSENNMTVTNIDVQSIEPVDTQMRDSLLKSVQMAIEISTQSIERAASHEARRHEQTAKGNLEKNKLQNEKAAESARMNLYELRAETAAVESSGQAKAEAEAQAEKTLIEGHMAIEAANLKAKALEIEENSKMEILEQQRKAEIEYMKTVNGLEIKKAKQMADIELKKSADLINAIGQDTITNIALAGPKAKVGLLGALGIRATLITDGKTPVNLYQAPNGAI 839
            I+R+ P  Y HVLD NSN++ VE GPK+ I Q+N+++   P R V +PP HYC ++NP     +         Q  L+    EIRL Q+PF LYPGE+L    EK I  L V+    AL L+AL DF+D +G   VAGD W  EGP T+ P+ E + +  +  TII +N AL L+A+ +  D++G  RVTGEEW+V  +GAYLP V+EE++ +V + +LT+   L++ A RN  D  G  R  GEEWLVT  D+  ++P+  E+++  V IT L    +C++LDP   +GK Q G+K + KG  SFFL+PGE L  GIQ++++L + Q L+L A+    +   EE +  + GD W+I+GP+ Y P  +VEV   R+ I L +NEGIYVQ+ KTG+VR V+G    +L Q EVLW+KEL P VE++L  G       G+ D  K         +      R+KTR V+YRVP N+AVQVYD+R++ +RVVFGP LV L P E+F VLSLSAG+PK+ +A ++L ++LGPD+ TD+I +ET DHARL+++ A N  F+  +     ET KLFSVPD++G AC+ IASR+RG VA  TFD+FH+ S RI++ AVFG +  +            R+  +F +N + V+++DVQS+EPVD + RD+L +SVQ+AIEI+T S E AA HEA+R EQ A+G LE+ K+ ++  AE AR  L EL A + AVES+G AKAEAE++AE   IEG  ++  A LKA+AL IE  ++++ +++ R+ E+ Y +    LE+ KA+Q+A++E+KK   +  AIG  TI ++A+AGP+ +V LL +LG+++TLITDG TP+NL+    G +
Sbjct:    7 IIRIPPYHYIHVLDQNSNVSRVEVGPKTYIRQDNERVLFAPMRMVTVPPRHYCTVANPVSRDAQGLVLFDVTGQVRLRHADLEIRLAQDPFPLYPGEVL----EKDITPLQVVLPNTALHLKALLDFEDKDGDKVVAGDEWLFEGPGTYIPRKEVEVVEIIQATIIRQNQALRLRARKECWDRDGKERVTGEEWLVTTVGAYLPAVFEEVLDLVDAVILTEKTALHLRARRNFRDFRGVSRRTGEEWLVTVQDTEAHVPDVHEEVLGVVPITTLGPHNYCVILDPVGPDGKNQLGQKRVVKGEKSFFLQPGEQLEQGIQDVYVLSEQQGLLLRALQPLEEGEDEEKVSHQAGDHWLIRGPLEYVPSAKVEVVEERQAIPLDENEGIYVQDVKTGKVRAVIG-STYMLTQDEVLWEKELPPGVEELLNKGQDPLADRGEKDTAK---------SLQPLAPRNKTRVVSYRVPHNAAVQVYDYREKRARVVFGPELVSLGPEEQFTVLSLSAGRPKRPHARRALCLLLGPDFFTDVITIETADHARLQLQLAYNWHFEVNDRKDPQETAKLFSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIRTAVFGFETSEAKGPDGMALPRPRDQAVFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEALSMAVESTGTAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELQRVQKVRELELVYARAQLELEVSKAQQLAEVEVKKFKQMTEAIGPSTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSTPINLFNTAFGLL 849

The following BLAST results are available for this feature:

BLAST of TCONS_00072364-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MVP	0.000e+0	45.39	Major vault protein OS=Homo sapiens GN=MVP PE=1 SV...	[more]

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TCONS_00072364-protein (polypeptide) - C. hemisphaerica