TCONS_00072327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072327-protein
Unique NameTCONS_00072327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length648

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072327-protein ID=TCONS_00072327-protein|Name=TCONS_00072327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=648bp
MANMVVSQAEYVRICYYTNWSQYRPGKAKFSPSHIDPFLCTHIVYAFAKI
VEHRLEPYEWNDDEYANYYKQIINLKNKNPALKILLAVGGWNHESQGSPF
SEMVKTRSNRQGFIQQSIRFLRQRGFDGLDLDWEYPASRTSPLSDKQRFT
VLCKELQQAFDQEARSSGKERLMLTAAVAAGKATIQRAYEVSKLGQSLDM
LHLMSYDLAGAWDGKTGHHTSMDANRKWSVPVGLDTWINGGFPANKIALG
LGTYGRSFTLTSKSNSKMGEKCKGAGASGPSTRESGFLSYYEICDKIKSG
MKVVQHPKAMAPYGHKDNYWVGYDDIESLRYKVKKLIKGRGLKGAMFWSL
DLDDFSGAHCNQGKFPLLNAVKKELGAQGTVTSIISKSAHIKTKPKIGEK
LLKSTRTTTTTTKAPMKSASNKKRCFAANVWLGHAAMDQWCIRNCADGNC
DPRFCSCEETSMKLSTTTTTQPTTTTTQPTTTTTPYTTTTTKPTTMAIRQ
TTTTIRPTTTTKPKKMIIRPITTTTPQTTATVQSSIMTTQPTATAVQQSM
KKSTNNPDQSSNIMKNTKRTKKCFAINIWYGQPLINDWCQKNCRDDSCEG
YKNYCSCDPDWKPNTSCKASKLFSANKNIEKWCSNTCPTGYCPKAFCH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044907XLOC_044907Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072327TCONS_00072327Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR029070Chitinase_insertion
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 11..353
e-value: 4.2E-124
score: 428.3
NoneNo IPR availableGENE3D3.20.20.80coord: 316..384
e-value: 1.1E-8
score: 34.5
NoneNo IPR availableGENE3D3.20.20.80coord: 10..265
e-value: 1.9E-70
score: 237.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..490
NoneNo IPR availableCDDcd02872GH18_chitolectin_chitotriosidasecoord: 13..375
e-value: 0.0
score: 539.454
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 14..353
e-value: 2.6E-84
score: 283.5
IPR029070Chitinase insertion domainGENE3D3.10.50.10coord: 266..315
e-value: 2.2E-22
score: 79.1
IPR029070Chitinase insertion domainSUPERFAMILY54556Chitinase insertion domaincoord: 254..323
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 126..134
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 324..376
coord: 11..254

Blast
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BLAST of TCONS_00072327-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 4.032e-126
Identity = 180/369 (48.78%), Postives = 251/369 (68.02%), Query Frame = 0 
Query:   14 ICYYTNWSQYRPGKAKFSPSHIDPFLCTHIVYAFAKIVEHRLEPYEWNDDEYANYYKQIINLKNKNPALKILLAVGGWNHESQGSPFSEMVKTRSNRQGFIQQSIRFLRQRGFDGLDLDWEYPASRTSPLSDKQRFTVLCKELQQAFDQEARSSGKERLMLTAAVAAGKATIQRAYEVSKLGQSLDMLHLMSYDLAGAWDGKTGHHTSM-------DANRKWSVPVGLDTWINGGFPANKIALGLGTYGRSFTLTSKSNSKMGEKCKGAGASGPSTRESGFLSYYEICDKIKSGMKVVQHPKAMAPYGHKDNYWVGYDDIESLRYKVKKLIKGRGLKGAMFWSLDLDDFSGAHCNQGKFPLLNAVKKEL 375
            +CY+TNW+QYR G+A+F P  +DP LCTH++YAFA +  H+L   EWND+     Y++   LK  NP LK LLA+GGWN  +Q   F++MV T +NRQ F+  +IRFLR+  FDGLDLDWEYP S+ SP  DK+RFT L ++L  AF QEA++SGKERL+L+AAV AG+  +   YEV K+ Q+LD ++LM+YD  G+W+  TGH++ +        A    +V   +  W+  G PA+K+ LG+ TYGRSFTL S S++++G    G+G  GP T+E G L+YYE+C    +  + +Q  K   PY  +DN WVG+DD+ES + KV  L K +GL GAM W+LDLDDF+G  CNQG++PL+  +++EL
Sbjct:   25 VCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDE---TLYQEFNGLKKMNPKLKTLLAIGGWNFGTQ--KFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQK--VPYIFRDNQWVGFDDVESFKTKVSYL-KQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQEL 385
The following BLAST results are available for this feature:
BLAST of TCONS_00072327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT14.032e-12648.78Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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