TCONS_00072205-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072205-protein
Unique NameTCONS_00072205-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length346

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072205-protein ID=TCONS_00072205-protein|Name=TCONS_00072205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
MTSFRKLVASTLTTDFRIACEIVRSNVGSLKPHEVLVKARYAGINATDIN
YTAGRYTKPGTPLPLDAGLEGVGEIVDVGQEVPSSMIGKPVGYLWNGAFA
EYVKLPAKFCLPLPSVKPEYVGLLVSGMTASMCLQQSGRIQKGEAVFISA
AAGGFGHLAVQLAKLHGCHVIGTCSSQQKTEYLKSLGCDHVINYVTEDLN
EVLKKSYPKGIDVFIESVGGDVFNACVNRLATNGRLVVLGYIGSYHSQAG
IDRSHRNATLMTKLLLKSATVSGFFLLNHPQEYKNHLPRLVELADQGKLQ
VKIDQTDDQGKPFVGLESVYDAVDYLYSRKSQGKVVVDLTNSNSKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044830XLOC_044830Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072205TCONS_00072205Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013149ADH_C
IPR013154ADH_N
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 11..337
e-value: 4.5E-14
score: 49.4
NoneNo IPR availableGENE3D3.90.180.10coord: 4..140
e-value: 5.7E-26
score: 90.6
NoneNo IPR availableGENE3D3.40.50.720coord: 141..304
e-value: 2.0E-32
score: 112.2
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 154..291
e-value: 1.1E-28
score: 99.7
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 32..91
e-value: 2.5E-8
score: 33.7
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 21..148
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 121..298

Blast
[Close]
BLAST of TCONS_00072205-protein vs. Swiss-Prot (Human)
Match: PTGR3 (Prostaglandin reductase 3 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.411e-98
Identity = 161/349 (46.13%), Postives = 231/349 (66.19%), Query Frame = 0 
Query:    3 SFRKLVASTLTTDFRIACEIVRSNVGSLKPH-EVLVKARYAGINATDINYTAGRYTKPGTPLPLDAGLEGVGEIVDVGQEVPSS-MIGKPVGYLWNGAFAEYVKLPAKFCLPLPSVKPEYVGLLVSGMTASMCLQQSGRIQKGEAVFISAAAGGFGHLAVQLAKLHGCHVIGTCSSQQKTEYLKSLGCDHVINYVTEDLNEVLKKSYPKGIDVFIESVGGDVFNACVNRLATNGRLVVLGYIGSYHSQAGIDRSHRNATLMTKLLLKSATVSGFFLLNHPQEYKNHLPRLVELADQGKLQVKIDQTD--DQGKPFVGLESVYDAVDYLYSRKSQGKVVVDLTNS-NSKL 346
            + +KLV + L+ +FR A  + R     L    ++LV+ R+ G+NA+DINY+AGRY  P    P D G EG+GE+V +G    +   +G+ V Y+  G+FAEY  +PA    P+PSVKPEY+ LLVSG TA + L++ G + +G+ V ++AAAGG G  A+QL+K   CHVIGTCSS +K+ +LKSLGCD  INY TE +  VLK+ YP+G+DV  ESVGG +F+  V+ LAT GRL+V+G+I  Y +  G+    +  TL  KLL KSA+V GFFL ++  +Y+  +  L+E+   G L  ++D  D   +G+ F GLES++ AV+Y+Y  K+ GK+VV+L +S NSKL
Sbjct:   32 AMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRY-DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLS-PVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGR-FTGLESIFRAVNYMYMGKNTGKIVVELPHSVNSKL 377
The following BLAST results are available for this feature:
BLAST of TCONS_00072205-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTGR31.411e-9846.13Prostaglandin reductase 3 OS=Homo sapiens GN=ZADH2... [more]
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