TCONS_00072140-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072140-protein
Unique NameTCONS_00072140-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072140-protein ID=TCONS_00072140-protein|Name=TCONS_00072140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MLRSVLSLTIIIAAVYACSDEKSSCPGWKILCKTNQAVRNLCKKTCGICK
DEKKEKEEKCGISKVPNIEAVTSANAPPGAWPWVVSLQTTWGYQFCGGSI
VSPNLIMTAATCLITRQDTPAKIMVVAGAHDIKEKSEYEQKIIAKSIIRH
PAYDYDKRGSHNIALIELSEPLKMNDHVMNVCMPKQYTRPKVGDTCIYLG
WGVPHQTSTTKLQQVPLSILKNRRYLGYQYIDAKYQQSDKPSIAYGNPLV
CQRADKTWQIDGVSNFRNSYSQYIAFSEVNTILKWLEEKEDKYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044800XLOC_044800Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072140TCONS_00072140Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 17..50
e-value: 8.1E-5
score: 32.0
IPR003582ShKT domainPFAMPF01549ShKcoord: 18..49
e-value: 8.4E-6
score: 26.1
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 18..49
score: 9.658
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 69..286
e-value: 4.9E-24
score: 95.8
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 73..285
e-value: 9.6E-34
score: 117.0
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 70..291
score: 20.095
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 75..263
e-value: 1.1482E-41
score: 144.341
NoneNo IPR availableGENE3D2.40.10.10coord: 102..175
e-value: 2.2E-23
score: 81.6
NoneNo IPR availableGENE3D2.40.10.10coord: 176..276
e-value: 5.5E-14
score: 51.9
NoneNo IPR availableGENE3D2.40.10.10coord: 71..101
e-value: 1.9E-13
score: 49.8
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 59..289

Blast
[Close]
BLAST of TCONS_00072140-protein vs. Swiss-Prot (Human)
Match: CTRB1 (Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.126e-24
Identity = 70/241 (29.05%), Postives = 115/241 (47.72%), Query Frame = 0 
Query:   61 GISKVPNIEAVTSANAPPGAWPWVVSLQTTWGYQFCGGSIVSPNLIMTAATCLITRQDTPAKIMVVAGAHDIKEKSEYEQKIIAKSIIRHPAYDYDKRGSHNIALIELSEPLKMNDHVMNVCMPKQYTRPKVGDTCIYLGWGVPHQTST---TKLQQVPLSILKN---RRYLGYQYID----AKYQQSDKPSIAYGNPLVCQRADKTWQIDGVSNFRN---SYSQYIAFSEVNTILKWLEE 288
            G+S++ N E     +A PG+WPW VSLQ   G+ FCGGS++S + ++TAA C +   D     +VVAG  D     E  Q +    + ++P +      +++I L++L+ P + +  V  VC+P        G  C   GWG     +     KLQQ  L +L N   ++  G +  D    A            G PLVCQ+ D  W + G+ ++ +   S S    ++ V  ++ W+++
Sbjct:   30 GLSRIVNGE-----DAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVRTSD-----VVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTV-NNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMICAGASGVSSCMGDSGGPLVCQK-DGAWTLVGIVSWGSDTCSTSSPGVYARVTKLIPWVQK 258
The following BLAST results are available for this feature:
BLAST of TCONS_00072140-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB11.126e-2429.05Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 S... [more]
back to top