TCONS_00072126-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072126-protein
Unique NameTCONS_00072126-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length721

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072126-protein ID=TCONS_00072126-protein|Name=TCONS_00072126-protein|organism=Clytia hemisphaerica|type=polypeptide|length=721bp
MDDKIKEENEIPTSEGKNDDIDDHEVDIEDVTSKEHAIENDHSMYSCSIH
ENNITVIHSENNETTTISSKDSVDQEKPASPTQVVVSDEPPPPYFTSYGN
ADIQSQLATKTGYEVTTYVTEDGQTGHLIIGNASNYPTDVSSSGIVTLGD
TNITTAIASPDGSVLSLGEEAMEQLAGLENFPPGAIQIATTQNPDGTTQL
QYILNEDPNIQDIESNIVVNTKFYKCDFEKCDKQFQSPYRLRLHSRTHAG
ALAAETIVCVEEGCGKRFATDADLQKHSKLHVGQKDFICEVVGCKKEYTT
AHHLKVHKRQHSGEKPFICDWVDCGKMFTTGYGLKSHYRTHTNERPYKCF
YDDCKKAFKTSGDLQKHIRTHTGERPFVCTYPGCNRSFTTSNIRKVHLRT
HTGEKPYRCEVEGCGRTFASATNHKNHARIHTGERPYLCEVPGCMKRFTE
YSSLYKHNIVHTHQKPYTCHLCLKTYRQTSTLAMHKRTVHGDELTEAELQ
GVNTIETTTYRPPKKIRRISQHDARETSIPPPSPAPSTSSTAATGYIQGM
SLIINNTDSSDFSGRISAQNVTESTEIPGAIAIPIQVTMNADGTIAGAPG
LNLTDGNGRIIPVNLSVSIPVLSSSQVENNTEHRHNTSEQVKEETDRNTG
HTPINSMYHNSPSASSEIHEEIITVIPDDSAQITPRQSNDISDEDMDDRD
VTDKYLTSHYNRKDFKTTSSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044793XLOC_044793Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072126TCONS_00072126Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 467..490
e-value: 0.27
score: 20.3
coord: 377..401
e-value: 0.009
score: 25.2
coord: 287..311
e-value: 0.012
score: 24.8
coord: 317..341
e-value: 0.0016
score: 27.7
coord: 407..431
e-value: 8.7E-4
score: 28.6
coord: 437..461
e-value: 0.23
score: 20.5
coord: 224..248
e-value: 0.016
score: 24.4
coord: 347..371
e-value: 9.5E-5
score: 31.8
coord: 257..281
e-value: 0.037
score: 23.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 259..281
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 439..463
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 289..311
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 379..401
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 349..371
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 319..341
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 409..431
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..248
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 469..490
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 377..406
score: 14.212
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 287..316
score: 13.775
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 467..495
score: 11.344
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 257..286
score: 12.258
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 224..253
score: 11.739
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 437..466
score: 13.09
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 347..376
score: 15.937
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 407..436
score: 15.646
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 317..346
score: 15.126
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 387..444
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 219..250
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 285..341
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 431..485
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 328..384
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 258..294
NoneNo IPR availableGENE3D3.30.160.60coord: 267..276
e-value: 0.16
score: 11.7
NoneNo IPR availableGENE3D3.30.160.60coord: 469..650
e-value: 2.1E-7
score: 30.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 347..371
e-value: 1.0E-5
score: 25.6
coord: 317..341
e-value: 3.5E-4
score: 20.8
NoneNo IPR availableGENE3D3.30.160.60coord: 68..236
e-value: 1.5E-4
score: 21.4
NoneNo IPR availableGENE3D3.30.160.60coord: 433..450
e-value: 7.4E-10
score: 38.2
NoneNo IPR availableGENE3D3.30.160.60coord: 417..432
e-value: 1.7E-9
score: 37.4
NoneNo IPR availableGENE3D3.30.160.60coord: 277..305
e-value: 8.9E-13
score: 47.5
coord: 338..364
e-value: 2.7E-19
score: 68.4
NoneNo IPR availableGENE3D3.30.160.60coord: 237..266
e-value: 4.8E-8
score: 32.7
NoneNo IPR availableGENE3D2.30.30.380coord: 401..416
e-value: 1.4E-5
score: 24.7
NoneNo IPR availableGENE3D2.40.155.10coord: 306..337
e-value: 5.8E-18
score: 65.3
coord: 365..400
e-value: 3.5E-22
score: 79.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..91
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 451..468
e-value: 2.9E-5
score: 23.7

Blast
[Close]
BLAST of TCONS_00072126-protein vs. Swiss-Prot (Human)
Match: ZNF76 (Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=1 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 5.150e-111
Identity = 167/285 (58.60%), Postives = 201/285 (70.53%), Query Frame = 0 
Query:  251 ALAAETIVCVEEGCGKRFATDADLQKHSK-LHVGQKDFICEVVGCKKEYTTAHHLKVHKRQHSGEKPFICDWVDCGKMFTTGYGLKSHYRTHTNERPYKCFYDDCKKAFKTSGDLQKHIRTHTGERPFVCTYPGCNRSFTTSNIRKVHLRTHTGEKPYRCEVEGCGRTFASATNHKNHARIHTGERPYLCEVPGCMKRFTEYSSLYKHNIVHTHQKPYTCHLCLKTYRQTSTLAMHKRTVHGDELTEAELQGVNTIETTTYRPPKKIRRISQHDARETSIPPPSP 534
              +A+ +V +E+   K    D+ + ++ K   VG + F C   GC + YTTAHHLKVH+R H+G++P+ CD+  CGK F TGYGLKSH RTHT E+PYKC  + C KAFKTSGDLQKH+RTHTGERPF C + GC RSFTTSNIRKVH+RTHTGE+PY C    CGR F SATN+KNH RIHTGE+PY+C VPGC KRFTEYSSLYKH++VHTH KPYTC  C KTYRQTSTLAMHKR+ HG      EL+     E   Y    + +++    A E S PP  P
Sbjct:  129 GFSADAVVALEQYASKVLH-DSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHG------ELEATEESEQALY----EQQQLEAASAAEESPPPKRP 402

HSP 2 Score: 162.54 bits (410), Expect = 1.527e-42
Identity = 80/216 (37.04%), Postives = 115/216 (53.24%), Query Frame = 0 
Query:  219 VNTKFYKCDFEKCDKQFQSPYRLRLHSRTHAGALAAETIVCVEEGCGKRFATDADLQKHSKLHVGQKDFICEVVGCKKEYTTAHHLKVHKRQHSGEKPFICDWVDCGKMFTTGYGLKSHYRTHTNERPYKCFYDDCKKAFKTSGDLQKHIRTHTGERPFVCTYPGCNRSFTTSNIRKVHLRTHTGEKPYRCEVEGCGRTFASATNHKNHARIHTGE 434
            V  + ++C ++ C + + + + L++H R H G        C    CGK FAT   L+ H + H G+K + C    C K + T+  L+ H R H+GE+PF C +  CG+ FTT    K H RTHT ERPY C    C + F ++ + + H+R HTGE+P+VCT PGC + FT  +    H   HT  KPY C    CG+T+   +    H R   GE
Sbjct:  160 VGDRAFRCGYKGCGRLYTTAHHLKVHERAHTG---DRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCST--CGKTYRQTSTLAMHKRSAHGE 370
The following BLAST results are available for this feature:
BLAST of TCONS_00072126-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF765.150e-11158.60Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE... [more]
back to top