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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072067-protein ID=TCONS_00072067-protein|Name=TCONS_00072067-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
AHERGASQSTRSKMAAQTQDWATQSLRQMVIEEIEVTYKTYGNPTKKTSS
EVEKQILEKAQSRDNYLQMVARLILHTKEVRGRVQQNQNINIAQQANLLG
QTVPNQQQQAQGTQPVANNLLNVSGGNNLQQNVQQIQQQLQQNANNVQQQ
QNNTIKQEQQQTNKAPDQPKAQQITGGTLFANSTLNQVAGMNNGQAVQVT
VKNGQIVNQQLQQRQNNTMVQQSQTNNTATNPQQQLQFQIAQQQQNNQQQ
QSNTQQNIQQLSNFITNANNPQLVMAVSRTFDKKSATTVGGDPKAPLSIA
IYPRGGECATLSPWIAPLTLDPSLNC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0001104 | RNA polymerase II transcription cofactor activity |
| GO:0003712 | transcription cofactor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription from RNA polymerase II promoter |
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| biological_process |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
| cellular_component |
GO:0016592 |
mediator complex |
| molecular_function |
GO:0001104 |
RNA polymerase II transcription cofactor activity |
| molecular_function |
GO:0003712 |
transcription cofactor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 233..253 |
| None | No IPR available | COILS | Coil | Coil | coord: 126..161 |
| None | No IPR available | GENE3D | 1.10.246.20 | | coord: 15..85
e-value: 7.9E-10
score: 38.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..21 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 144..171 |
| IPR019087 | Mediator of RNA polymerase II transcription subunit 15 | PFAM | PF09606 | Med15 | coord: 28..94
e-value: 9.1E-10
score: 37.8 |
| IPR003101 | Coactivator CBP, KIX domain | SUPERFAMILY | 47040 | Kix domain of CBP (creb binding protein) | coord: 18..78 |
Blast
The following BLAST results are available for this feature:
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