TCONS_00071887-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071887-protein
Unique NameTCONS_00071887-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071887-protein ID=TCONS_00071887-protein|Name=TCONS_00071887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=121bp
FSVFFEGEDYYTRVEDFNEGDRALSVITGEKVVQVNPECHEVTLASGESI
KYGKLLIATGGTPRGLSVFDTQGVKDKLTLFRNIADFQSLTSAVSEAEHV
AVVGGGFLGSELACALASHGR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044625XLOC_044625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071887TCONS_00071887Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00368FADPNRcoord: 52..70
score: 28.97
coord: 99..117
score: 42.98
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 51..121
e-value: 4.5E-13
score: 48.7
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 2..50
e-value: 2.1E-5
score: 24.1
IPR023753FAD/NAD(P)-binding domainPFAMPF07992Pyr_redox_2coord: 19..120
e-value: 2.3E-17
score: 63.1
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 7..120

Blast
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BLAST of TCONS_00071887-protein vs. Swiss-Prot (Human)
Match: AIFM1 (Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.470e-28
Identity = 56/123 (45.53%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    2 SVFFEGEDYYTRVEDFNEGDRA-LSVITGEKVVQVNPECHEVTLASGESIKYGKLLIATGGTPRGLSVFDTQG--VKDKLTLFRNIADFQSLTSAVSEAEHVAVVGGGFLGSELACALASHGR 121
            S++F+   +Y   +D    +   ++V+TG+KVVQ++   + V L  G  I Y K LIATGGTPR LS  D  G  VK + TLFR I DF+SL     E + + ++GGGFLGSELACAL    R
Sbjct:  202 SIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKAR 324
The following BLAST results are available for this feature:
BLAST of TCONS_00071887-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIFM16.470e-2845.53Apoptosis-inducing factor 1, mitochondrial OS=Homo... [more]
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