TCONS_00071877-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071877-protein
Unique NameTCONS_00071877-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071877-protein ID=TCONS_00071877-protein|Name=TCONS_00071877-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
NGLLDHLSTVLTTTHKIQVQRTEKHIQRKLTDVLKNSKKASTKTSGLVRE
DLHISQDQQTLKSTSPIEAENKPKTASSAKFENKKHAKNISKRKTKKLIF
ISLGLYNDRKEVMRSIPSDYNMTEMDGSKCPINECQITYDRTLINQSDAI
FFDGRIIHELDIEILKRLRSKSESQIWIWMMHENPNFTYYNITQYDQFFN
WSATYRPSSDIYIPYFGIQKLPPSQYLKQRDAQTMGHHSVTPFTFGRTLT
PGHKGGQKKTPSLKHRQLPYLKNFAEGKDKKVLVVISHCDEYRMQMIRTL
RQYIPVDLYGGCKDIINPELVQCHRDSPECEALMKRYKFYLAIENFYCTD
YVTEKYYLNGLIRHIVPIVLNGGNYSDNENVFLPKSYINIEKFDTLKKLG
EYLNYLDKNDTAYNEYHQWSYEYSVEPKHCMCKVCKALWDHEEIDRPIKT
LKLSDFWDAEKLCQSYDREKFQKYIYIKNETTPKA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044618XLOC_044618Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071877TCONS_00071877Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 123..215
e-value: 3.2E-19
score: 69.3
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 278..451
e-value: 1.1E-43
score: 148.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..89
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 257..440
coord: 127..229

Blast
[Close]
BLAST of TCONS_00071877-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.364e-25
Identity = 84/317 (26.50%), Postives = 132/317 (41.64%), Query Frame = 0 
Query:  134 ECQITYDRTLINQSDAIFFDGRIIHELDIEILKRLRSKSESQIWIWMMHENPNFTYYNITQYDQFFNWSATYRPSSDIYIPYFGIQKLPPSQYLKQRDAQTMGHHSVTPFTFGRTLTPGHKGGQKKTPSLKHRQLPYLKNFAEGKDKKVLVVISHC--DEYRMQMIRTLRQYIPVDLYGGCKDIINPELVQCHRDSPECEAL--MKRYKFYLAIENFYCTDYVTEKYYLNGLIRHIVPIVLNGGNYSDNENVFLPKSYINIEKFDTLKKLGEYLNYLDKNDTAYNEYHQWSYEYSVEPKHCMCKVCKALWDHEEIDR 446
            +C IT DR +  Q+DA+    R +       L R   + + Q WIW   E+P+  +  +   D +FN + +YR  SDI+ PY  ++                                    GQ   P L              K + V   +S+   +  R++  ++L+ ++ VD+YG           + H+  P+   +  + RYKFYLA EN    DY+TEK + N L    VP+VL G + S+ E    P ++I+++ F + K L  YL  LDK+   Y  Y +W               CKA W  +E  R
Sbjct:   89 DCNITADRKVYPQADAVIVHHREVMYNPSAQLPR-SPRRQGQRWIWFSMESPSHCW-QLKAMDGYFNLTMSYRSDSDIFTPYGWLEPW---------------------------------SGQPAHPPLN----------LSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYG-----------RSHKPLPQGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVL-GPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQEESR 348
The following BLAST results are available for this feature:
BLAST of TCONS_00071877-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT65.364e-2526.50Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
back to top