TCONS_00071144-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071144-protein
Unique Name	TCONS_00071144-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	648

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071144-protein ID=TCONS_00071144-protein|Name=TCONS_00071144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=648bp
MGSSYSSISDLPQNEFLLKLCNEVPIKRDDKFWDQLLSFKFSTPLERSNS
RLIRENTEKLCSSIASNNKVTANFTTLVDVAIFYGREMITNRENLKEDES
SCNKCRNALMIIRLCCEHMVENNTEDVCVAFFNTPHTESKSILEEFLLQL
TEIIAFVDADQITYYTQMEAITTILVLLSSQMFDLKSTSKSKIFQMIMRS
KCSNNASETVRKLLHNYIRNEPAPVSSSLVGWATSGIWSMFTGGSGGETG
EKSSTNIQPNSPNELHPLSSHSALLLLALCFHYTKDGNPYREALFRCKPG
RKSEGPEAAVGRSFPLNFKRLYSSLTRDLKHDQTVLLLYLLLHKNESFHN
FALRQKDLQSVVIPILQVLYHAEQRNAHHIYMALIVILIFTQNEEFNIAV
HEMPVIDAEWFAEKKLTNISLGSLLIIIILRTIQYNMAKMRDKYLHTNCL
ASLANMSNSFKNLHSIAIQKFVTLFQSLIKRRAKLIEKTKDIDTTIEHES
NELADLAVLEEILHMMIEILNACLTNNIKDNSTIVFAMLRHKELFQDFKS
NPKFQDVVHNIDSILSYFGSRVDEKMDSVNTAEGFISIIEEAAGTWPKDD
IKKNAHLKFKYMEEEAAEEFFVPYIWSIIYKSSFLYWNSDKILLFHPV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044223	XLOC_044223	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071144	TCONS_00071144	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF09742	Dymeclin	coord: 1..627 e-value: 3.3E-133 score: 445.3

Blast

[Close]

BLAST of TCONS_00071144-protein vs. Swiss-Prot (Human)
Match: DYM (Dymeclin OS=Homo sapiens GN=DYM PE=1 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 4.195e-149
Identity = 260/681 (38.18%), Postives = 400/681 (58.74%), Query Frame = 0

Query:    1 MGSSYSSISDLPQNEFLLKLCNEVPIKRDDKFWDQLLSFKFSTPLERSNSRLIRENTEKLCSSIASNNKVTANFTTLVDVAIFYGREMITNRENLKEDESSCNKCRNALMIIRLCC------------EHMVENNTEDVCVAFFNTPHTESKSILEEFLLQLTEIIAFVDADQITYYTQMEAITTILVLLSSQMFDLKSTSKSKIFQMIMRSKCSNNASETVRKLLHNYIRNEPAPVSSS------------LVGWAT---SGIWSMFT-GGSGGETGEKSSTNIQPNSPNELHPLSSHSALLLLALCFH--YTKDGNPYREALFRCKPGRKSEGPEAAVGRSFPLNFKRLYSSLTRDLKHDQTVLLLYLLLHKNESFHNFALRQKDLQSVVIPILQVLYHAEQRNAHHIYMALIVILIFTQNEEFNIAVHEMPVIDAEWFAEKKLTNISLGSLLIIIILRTIQYNMAKMRDKYLHTNCLASLANMSNSFKNLHSIAIQKFVTLFQSLIKRRAKLIEK-TKDIDTTIEHESNELADLA----VLEEILHMMIEILNACLTNNIKDNSTIVFAMLRHKELFQDFKSNPKFQDVVHNIDSILSYFGSRVDEKMDSVNTAEGFISIIEEAAGTWPKDDIKKNAHLKFKYMEEEAAEEFFVPYIWSIIYKSSF-LYWNSDKILLF 645
            MGS+ S I DLP+NE+L KL     I  +D FW+QLLSF F  P   S  +L+ E T  +C S+  NN  T N   L+ V +   +E+  + E   ++     +  NAL II  CC            E  +    E+     +++   +    L   L+QL   I  +D   ITY   +EAI+T++V LS Q+F  +   +S   + +MR  C    S+ V+ LL+N+IR E  P   +            L G A+   +G+W++FT GG G +            SP    PL++ S LLLL L      +   NPYR+A+   K  + S    +++  +F +NF  LY++L      DQ  LLLY LLH+N +   + L + D++++V+PIL++LYH E+RN+HH+YMALI++LI T+++ FN ++HE+ + +  W++E+ LT ISLGSLLI++++RTIQYNM + RDKYLHTNCLA+LANMS  F++LH  A Q+ ++LF  L K+  K++E+ T+ +  ++      L D A    V+EE++ MM+EI+N+CLTN++  N  +V+A+L  ++LF+ F+++P FQD++ NID ++S+F SR+ +    + + E  + II++     PKD +KK   LKFKY+EEE  EEFF+PY+WS++Y S+  LYWN   I LF
Sbjct:    1 MGSNSSRIGDLPKNEYLKKLSGTESISENDPFWNQLLSFSFPAPTSSSELKLLEEATISVCRSLVENNPRTGNLGALIKVFLSRTKELKLSAEC--QNHIFIWQTHNALFII--CCLLKVFICQMSEEELQLHFTYEEKSPGNYSSDSEDLLEELLCCLMQLITDIPLLD---ITYEISVEAISTMVVFLSCQLFHKEVLRQSISHKYLMRGPCLPYTSKLVKTLLYNFIRQEKPPPPGAHVFPQQSDGGGLLYGLASGVATGLWTVFTLGGVGSKAAA---------SPELSSPLANQSLLLLLVLANLTDASDAPNPYRQAIMSFKNTQDSSPFPSSIPHAFQINFNSLYTALCEQQTSDQATLLLYTLLHQNSNIRTYMLARTDMENLVLPILEILYHVEERNSHHVYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSSNDVPLPDYAQDLNVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQNIDLVISFFSSRLLQAGAEL-SVERVLEIIKQGVVALPKDRLKKFPELKFKYVEEEQPEEFFIPYVWSLVYNSAVGLYWNPQDIQLF 664

The following BLAST results are available for this feature:

BLAST of TCONS_00071144-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071144-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYM	4.195e-149	38.18	Dymeclin OS=Homo sapiens GN=DYM PE=1 SV=1	[more]

You are here

TCONS_00071144-protein (polypeptide) - C. hemisphaerica