TCONS_00071123-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071123-protein
Unique NameTCONS_00071123-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071123-protein ID=TCONS_00071123-protein|Name=TCONS_00071123-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MSTNSVYHDGEFEVPPSEATSLLCKNETSNGYCTISCEEKSNKEEENFFM
KSTSSIDSGCEEHEINQSQISHRSILATLVEKVSEDNKAPLFLTIFTILP
VLQGSAVLGVPYAFLVGGKAFLPAALFICVIATICSNLLIDSLYEVSPRS
QRRKRVYDGYEDLALACWGRFGSHVVKAMTILYFAMNNVVNMVLLFKSLD
NLLHGLLPITTNELGYLFVLLLLPILFGVRRFSIFGYFGLIGTVAVLIAC
ITSIVVFIQHSGDWATHYHELPTIDWERYPVAISIMMYTVIIAPTLPNIE
ATMTDRSQAPASVYISFGISSIFKSIYGIIAVLTFGLSTKELIATNVSEL
SIPSRYIMSIMLIVYVFCNSSYFIYLMLDIIDQILIKNVSGKIASGERYR
IPWMLFSRPLCLVILVVTSLVMPFFALVSGVVGAICGSFLAFISPVLFHL
KLKWNNMSLLRRVMEILLLILTILLGSLTTFTSMNELIKAIRIHHDV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044205XLOC_044205Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071123TCONS_00071123Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 95..478
e-value: 4.2E-38
score: 131.0

Blast
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BLAST of TCONS_00071123-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.069e-24
Identity = 103/409 (25.18%), Postives = 192/409 (46.94%), Query Frame = 0 
Query:   96 FTILPVLQGSAVLGVPYAFLVGGKAFLPAALFICVIATICSNLLIDSLYEVSPRSQRRKRVYDGYEDLALACWG-RF---GSHVVKAMTILYFAMNNVVNMVLLFKSLDNLLHGLLPITTNELGYLFVLLLLPILFGVRRFSIFGYFGLIGTVAVLIACITSIVVFIQHSGDWATHYHELPTIDWERYPVAISIMMYTVIIAPTLPNIEATMTDRSQAPASVYISFGISSIFKSIYGIIAVLTFGLSTKELIATNVSELSIPSRYIMSIMLIVYVFCNSSYFIYLMLDIIDQILIKNVSGKI----ASGERYRIPWMLFSRPLCLVILVVTSLVMPFFALVSGVVGAICGSFLAFISPVLFHLKLKWNNMSLLRRVMEILLLILTILLGSLTTFTSMNELIKAIRIHHD 496
            + +   +QG  VLG+PYA L GG   L   +F  V+      +LI  LYE +   +   RV D Y  +A AC   RF   G  VV    I+   M  ++ +V+    + N   GL P++      +   +LLP  F ++       F L+ T+A  +  I  I   +  + DWA    +   ID +++P++I I++++      LP++E  M   S+    +  +   + + K ++ ++A LT+   TKE+I  N   L    R +++I L+     +     +  ++++++ L +  S        SG+     W L  R   +V  ++ ++ +P FAL+ G+ G++ G+ L F+ P LFHL+L W  +   +   ++ + ++  +        S+  LI+A R + +
Sbjct:  123 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEV-VRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGL-PVSQKSWSIIATAVLLPCAF-LKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKF-YIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDN---LPGSIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAYRTNAE 524
The following BLAST results are available for this feature:
BLAST of TCONS_00071123-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT2.069e-2425.18Vesicular inhibitory amino acid transporter OS=Hom... [more]
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