TCONS_00071056-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071056-protein
Unique NameTCONS_00071056-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length701

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071056-protein ID=TCONS_00071056-protein|Name=TCONS_00071056-protein|organism=Clytia hemisphaerica|type=polypeptide|length=701bp
METGTEEYFWVQCEYPQCMKWRKLLSGVQDEIKNIQWYCHMNPDKAYSFC
DAPQQKMQVKKGETVVFSELELGSLVMAKMAGYPSWPAIITKDPAEPEGS
HIIRYQDGTNDPKYYHVEFLGQMHTHAWISARQVQIYNTSSGILVFDERA
MKKKKLKEEFLKSKQEASTFMNFSPEERLKRIIFQWKEPPKPVRDIGTAG
PKLKVKFPGPSKRRGRKPKEKPSHEDDQEVPTLDNQNIVQQHDLSQFETR
MMNINGTLCPVLVPQSTSSFQNYQSLPQTPSWNIWGQAASKNPPASPYNV
FDFNNNGNTAPQRPSTDQKSLQNAMRVKRLQSPMAAANRYKSVVPVNRSK
PILKKRTKESVPKKKTKQEAKEEGSAQITTFENEESFWKEFKPFWEDCIK
RNINEKKMSYVVKWHGKKISLFKFYQTVQHAGGYKAATSHWKIWTNICCE
VIGKMFVDNTFATLKKAYRNILLQFEQERKYPLLVKKRQEEKAKAAELEQ
LARTQSTLPGGGLAIVPRQSPVYLPEDLGLPQSLNVLDSCEDGSLQLPAL
NSTVGDILKGLAPSTQKKSKPSLVDLPSSNPDSPMFCFSQESRASSSPTL
PSEIGMDAALLQINTLEGELSTLGGLDDVGQDQSLPEDVFLDNKSTPALE
EQNELKAYQPVSGSSTQDSVEFDAVMGELTDLEDTLLDMAGDLLGGTKLP
S
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044145XLOC_044145Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071056TCONS_00071056Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR001606ARID_dom
IPR011124Znf_CW
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 70..138
e-value: 6.0E-5
score: 32.4
IPR000313PWWP domainPFAMPF00855PWWPcoord: 71..168
e-value: 3.7E-11
score: 43.2
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 72..140
score: 12.217
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 389..481
e-value: 0.0011
score: 18.9
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 384..476
e-value: 5.7E-10
score: 39.6
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 381..480
score: 13.072
IPR001606ARID DNA-binding domainSUPERFAMILY46774ARID-likecoord: 379..478
NoneNo IPR availableSMARTSM01014ARID_2coord: 378..476
e-value: 2.5E-4
score: 30.4
NoneNo IPR availableGENE3D2.30.30.140coord: 63..180
e-value: 2.4E-15
score: 56.0
NoneNo IPR availableGENE3D1.10.150.60coord: 354..503
e-value: 4.8E-13
score: 48.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..238
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 66..180
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 9..55
e-value: 1.4E-13
score: 50.6
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 4..58
score: 12.068

Blast
[Close]
BLAST of TCONS_00071056-protein vs. Swiss-Prot (Human)
Match: ZCPW2 (Zinc finger CW-type PWWP domain protein 2 OS=Homo sapiens GN=ZCWPW2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.166e-22
Identity = 62/181 (34.25%), Postives = 94/181 (51.93%), Query Frame = 0 
Query:   10 WVQCEYPQCMKWRKLLSGVQDEIKNIQ-WYCHMNPDKAYSFC-----DAPQQKMQVKKGETVVFSELELGSLVMAKMAGYPSWPAIITKDPAEPEGSHIIRYQDGTNDPKYYHVEFLGQMHTHAWISARQVQIYNTSSGILVFDERAMKKKKLKEEFLKSKQEASTFMNFSPEERLKRIIF 184
            WVQCE   C+KWR L S    ++ + + WYC MN D  Y+ C     D P++    + G  +V+S+L LGSLV+ K+  +PSWP I+   P   +G ++    DG  +   YH+EFLG  H+ +WI A  V  Y+ +        +  K K  K+ +  + QEA     +S E+RL+    
Sbjct:   30 WVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEEDFPEESQLHQCGFKIVYSQLPLGSLVLVKLQNWPSWPGILC--PDRFKGKYVTYDPDGNVEE--YHIEFLGDPHSRSWIKATFVGHYSITL-------KPEKCKNKKKWYKSALQEACLLYGYSHEQRLEMCCL 199
The following BLAST results are available for this feature:
BLAST of TCONS_00071056-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZCPW25.166e-2234.25Zinc finger CW-type PWWP domain protein 2 OS=Homo ... [more]
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