TCONS_00071022-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071022-protein
Unique NameTCONS_00071022-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1957

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071022-protein ID=TCONS_00071022-protein|Name=TCONS_00071022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1957bp
TVNISENFCTKTKFFLDEFEMEDLLTKGRQSAEEIFQDVCSIPLKKQRLD
SILRTILHPLKVFDDDTASFCSWLISYEQKFEEFIKQLKTFDTSTVCGLV
WNANFFAYRCRDCGISPCMSLCADCFAAGNHEGHDFNMFKSQAGGACDCG
DRNVMKPSGFCHHHGKVEGSKQKAIPEKLIWVAQILIPRLIICLYEKTKN
KDEAMEEDSSLDVEPIIDFLNKISEVEALREIFCEKILSSVDATFDNYLV
SSNSSEVTSLVSCEASNGRKIIRSVSTETNTIEMTVSNTCDGLGEPYKPN
EVESPTLSRSNIKENNKQTFLQYLMEVLVKTEFPTQLATLLLQMLPNQKY
KEQFTRLFCRQYSAVGKSLTTSTNPDLLSNHMVHVSVQLFSNEQLAFKMV
KEENLLFKIIFVLSKMVGECLDNYSLEVNGNETSIMAVNCDNKILSGHCY
WPIASDLTNLLSHQSVAKVFLETGDCLNWWMRFVSLLTGMNINHMQLLTH
VELESKTYYAAFSIEFESVAAVMWEVYRSVQKMNERVHVSKMLEVSAATL
ISWYSFVPQSLKKPSFTFHLSLHRYFALFASLAINQFDEEVTKILPQSIA
KSGLNYLVSTLAALQEIRSGFWLYNGHQIKCQAQSYMQSYFCNSMLDLDV
FFVQMGMVVLPPSYIMDLLIDRFCIRDWFQFGECEEDDEKSLLLVDAFLN
TILLLLTHHIYTGISEEEVMRKDIIANLSVSDKTHSQLLDYVPTRPGDTQ
SINKHFDNVLKSVSNYKSPAVESFAMQQGMYTLKDCIWEEEFDLNHLKQR
IYKKSDQQKALDNYNNHIQQKGLSTTGNAWPPLRKPSDVHPSMKTMFRLL
EDKQLHQVLIFIIYKAVTEEQMIPESTMISTLHLLQLVLSHQKSNEAPMN
QDAKDTKNKLMEITASYLHHTDQKETRENILAEIHQEISKDNEMNRKFQK
HQETIQQHQTGEEVLFEEDDITFFMADHFFNILFKPLCLHMDTLLEHGVY
SVGGTCKHFKNLLQQLPDEHKTFLKYLLMYWNRLLKQRDVKPQHLPFVKR
KTDSKSFATVLELLMENFERVFQVYEPMVGFPYTPFDIELPSASLVNNAF
QCIKQNHSSPLVKKDINYFVNSHNQKITPSEQSEEPMEQNNDTAEEGVED
SEMENQLEDENSAMKNTRSTPCQSKIDDEKCSLVNLLMHLKKRMEDSRKS
NTTPRNVNLTKVCAGDGAYYLGTILKDHLCNDQVVEETLSPTTVNSKAKE
DRKLRALEIQKVLMAEFASRQTKFMDGLGKTMDAEEMEGVEETSNVESYE
CVICTKKEESTENSPIGLIVLLQPSTVLGKRHEERYEANHYVASQIHEDY
LSNKRKAFMPHFDTRSIRSALEVGLDCGINIQSCGHYIHVHCQISYFKSL
QDEQSRLLNLEKGEFTCPMCRQMSNGVLPILPTFIKTSTAQDLMKGKTFE
ERCADINKFLTFYQQGGLTQFTARALEFTMLTASISTLAQKMEELIKNAN
SKVFEFYYGSNWKWTDKYFVLLGSLRQNLECEMEYHLRNPFKKRRSCFID
ILELFQFHCQYVSSPLRLRWNELCYGSDELEESTAAGKKKSSLTYNEIPL
LMVDAKNLVLQFILTWPHHASKGEFLHVIQLCFNLNFVQALISIGFSLEP
SEVESWIQSSNKGGESGKIQQCAGAVWEHSKNWKRNQPQDAPMEQLLSCS
VLSPQALAMKVEEYCSIFLKFCWFVQQVWRGRPTSDVDQLCTPIPSTVGQ
LAVDLQLGGNQTAETFDLTDCLSVPRGNLCEVISKWCQQVEEKFDSQVNL
VDLLPRTIHWQSPKLISLPKEYDSLFQRYRKEKCVRCNTTPNDPTICLVC
GAFLCFHASCCTNSKGVNECVQHSMECGCGTGVFLVISSSVTLIIRETRV
TLWGSVYLDSFGEEDKDLRRGKPLFLSEERYARLEEEWRAQILDRATRRW
GIHQNRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044131XLOC_044131Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071022TCONS_00071022Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 95..165
e-value: 5.9E-17
score: 72.3
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 97..164
e-value: 5.2E-18
score: 64.9
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 95..166
score: 9.922
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1278..1425
e-value: 1.3E-7
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1127..1173

Blast
BLAST of TCONS_00071022-protein vs. Swiss-Prot (Human)
Match: UBR3 (E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens GN=UBR3 PE=2 SV=2)

HSP 1 Score: 553.903 bits (1426), Expect = 5.671e-165
Identity = 317/871 (36.39%), Postives = 490/871 (56.26%), Query Frame = 0
Query:   70 FCSWLISYEQKFEEFIKQLKTFDTSTVCGLVWNANFFAYRCRDCGISPCMSLCADCFAAGNHEGHDFNMFKSQAGGACDCGDRNVMKPSGFCHHHGKVEGSKQKAIPEKLIWVAQILIPRLIICL--YEKTKNKDEAMEEDSSLD-------VEPIIDFLNKISEV-EALREIFCE--------KILSS-------VDATFDNYLVSSNSSEVT--------SLVSCEASNGRKIIRSVSTETNTIEMTVSNTCD------GLGEPYKPNEVESPTLSRSNIKENNKQTFLQYLMEVLVKTEFPTQLATLLLQMLPNQKYKEQFTRLFCRQYSAVGKSLTTSTNPDLLSNHMVHVSVQLFSNEQLAFKMVKEENLLFKIIFVLSKMVGECLDNYSLEVNGNETSIMAVNCDNKILSGHCYWPIASDLTNLLSHQSVAKVFLETGDCLNWWMRFVSLLTGMNINHMQLLTHVELESKTYYAAFSIEFESVAAVMWEVYRSVQKMNERVHVSKMLEVSAATLISWYSFVPQSLKKPS---FTFHLSLHRYFALFASLAINQFDEEVTKILP-QSIAKSGLNYLVSTLAALQEIRSGFWLYNGHQIKCQAQSYMQSYFCNSMLDLDVFFVQMGMVVLPPSYIMDLLIDRFCIRDWFQFGECEE----DDEKSLLLVDAFLNTILLLLTHHIYTGISEEEVMRKDIIANLSVSDKTHSQLLDYVPTRPGDTQSI---NKHFDNVLKSVSNYKSPAVE-SFAMQQGMYTLKDCIWEEEFDLNHLKQRIYKKSDQQKALDNYNNHIQQKGLSTTGNAWPPLRKPSDVHPSMKTMFRLLEDKQLHQVLIFIIYKAVTEEQMIPESTMISTLHLLQLVL 889
            +C  L++    ++EF   ++ +D + +CGLVW ANF AYRCR CGISPCMSLCA+CF  G+H GHDFNMF+SQAGGACDCGD NVM+ SGFC  H     S    +P+ L+ +++ ++PR I CL  Y +    + A +  S  D       +EP I FL  ++++  A+R +  +        K L+S       V  + + YL++  SS +T         +    A      ++     T T+    S+  D      GLG+  K  ++ S T  +S +     ++FL+ L+   +K EFP ++ T LL MLP+Q+YK  FT+ F + Y+ + K+L  S   D +SN +VH+SVQLFSNE+LA ++ +E  LL  ++ VL  M+  CL    L+   N   ++ VNC   +L  + YWP+ SD  N+LSHQSVAK FLE    L  WM FVS   GMN+N  +L  HVE ES+TYYAAF+ E E+ A  MW +    +    + +   ++      L  W+  +   + +P+    TFHL LHRY+A+F S A+   + ++  +LP Q +    + + +   A+L EI S  W+ NG QIK QA +Y+QS+FCNSM+D D++ +Q+    L P Y +  + +RF + D        +    D E    +++  L  +++LL+  ++ G+S++E++R +++A L ++D+THS LLD +P  P     I   +  F++VL +V+++K+P  E   +MQQGMYT K  +W++EFD   +  R   + D Q A+D Y   ++Q G    GN WPP +K + +HPS K + RLL  K LH VL  ++YK + + Q + E  +   L+L++L L
Sbjct:   93 WCKCLLAGGGGYDEFCAAVRAYDPAALCGLVWTANFVAYRCRTCGISPCMSLCAECFHQGDHTGHDFNMFRSQAGGACDCGDSNVMRESGFCKRHQIKSSSNIPCVPKDLLMMSEFVLPRFIFCLIQYLREGYNEPAADGPSEKDLNKVLQLLEPQISFLEDLTKMGGAMRSVLTQVLTNQQNYKDLTSGLGENACVKKSHEKYLIALKSSGLTYPEDKLVYGVQEPSAGTSSLAVQGFIGATGTLGQVDSSDEDDQDGSQGLGK-RKRVKLSSGTKDQSIMDVLKHKSFLEELLFWTIKYEFPQKMVTFLLNMLPDQEYKVAFTKTFVQHYAFIMKTLKKSHESDTMSNRIVHISVQLFSNEELARQVTEECQLLDIMVTVLLYMMESCLIKSELQDEENSLHVV-VNCGEALLKNNTYWPLVSDFINILSHQSVAKRFLEDHGLLVTWMNFVSFFQGMNLNKRELNEHVEFESQTYYAAFAAELEACAQPMWGLLSHCKVRETQEYTRNVVRYCLEALQDWFDAI-NFVDEPAPNQVTFHLPLHRYYAMFLSKAVKCQELDLDSVLPDQEMLMKLMIHPLQIQASLAEIHSNMWVRNGLQIKGQAMTYVQSHFCNSMIDPDIYLLQVCASRLDPDYFISSVFERFKVVDLLTMASQHQNTVLDAEHERSMLEGALTFLVILLSLRLHLGMSDDEILRAEMVAQLCMNDRTHSSLLDLIPENPNPKSGIIPGSYSFESVLSAVADFKAPVFEPGGSMQQGMYTPKAEVWDQEFDPVMVILRTVYRRDVQSAMDRYTAFLKQSG-KFPGNPWPPYKKRTSLHPSYKGLMRLLHCKTLHIVLFTLLYKILMDHQNLSEHVLCMVLYLIELGL 959          

HSP 2 Score: 323.553 bits (828), Expect = 4.118e-89
Identity = 269/961 (27.99%), Postives = 443/961 (46.10%), Query Frame = 0
Query: 1079 VGFPYTPFDIELPSASLVNNA-----FQCIKQNHSSPLVKKDINYFVNSHNQ---KITPSEQSEEPMEQNNDTAEEGVEDSEME-NQLEDENSAMK--NTRSTP-CQSKIDDEKCSLVNLLMHLKKRMEDSRKSNTTPR--------NVNLTKVCAGDGAYYLGTIL----KDHLCNDQVVEET-------LSPTTVNSKAK-----EDRKLRALEIQKVLMAEFASRQTKFMDGLGKTMDAEEMEGVEETSNVES------YECVICTKKEESTENSPIGLIVLLQPSTVLGK-------------RHEERYEANHYVASQIHEDYLSNKRKAFMPHFDTRSIRSALEVGLDCGINIQSCGHYIHVHCQISYFKSLQDEQS-RLLNLEKGEFTCPMCRQMSNGVLPILPTFIKTSTAQDLMKGKTFEERCADINKFLTFYQQGGLTQFTARALEFTMLTASISTLAQKMEEL---IKNANSKVFEFYYGSNWKWTDKYFVLLGSLRQNLECEMEYHLRN------PFKKRRSCFIDILELFQFHCQYVSSPLRLR-WNELCYGSDELEESTAAGKKKSSLTYNE----IPLLMVDAKNLVLQFILTWPHHASKGEFLHVIQLCFNLNFVQALISIGFSLEPSEVESW-----IQSSNKGGESGKIQQCAGAVWE--HSKNWKRNQPQDAPMEQLLSCSVLSPQALAMKVEEYCSIFLKFCWFVQQVWRGR--PTSDVDQLCTPIPSTVGQLAVDLQLGGNQTAETFDLTDCLSVPRGNLCEVISKWCQQVE---EKFDSQVNLVDLLPRTIHWQSPKLISLPKEYDSLFQRYRKEKCVRCNTTPNDPTICLVCGAFLCFHASCCTNSKGVNECVQHSMECGCGTGVFLVISSSVTLIIRETRVTLWGSVYLDSFGEEDKDLRRGKPLFLSEERYARLEEEWRAQILDRATRRWGIHQNRL 1957
            VG P    D   P ++LV+N      +  ++   ++P VK+D     +S N    + + + Q    + +     +E +  S  E NQ+    ++ K     S P   + I + K S+++LL+ L  ++   + S   P            + K   GDG   +  IL         N +++EE        + P  V +  K     E+R+ +A E Q+ L+AEFASRQ  FM+     +D+ E +   E +  E       Y+CVIC +   S+E+ P GL+VLLQ S+VLG+               E+ Y  +   A  +H+  LS  ++    +F   S   A+ +G + G+ +Q+CGH +H+ C  SY +SL+++Q  +  +++KGEFTCP+CRQ +N VLP  P     +        K+ ++   ++ +      QG    F +            + L+++ME +   IKN   K +  Y  +     + +  +    R NLE E+ +   N          +RSC   +  +   H +  S       W +L     +LEE          L Y E    +P+L  D  +L+L  IL  P    K  F  ++++ F L + QAL ++       +  +W     ++ S    E       +  + E    K +     Q+  M   ++    SP+++   ++++C  FL+    +Q    G   P+   ++  + + S +G L    Q     T   F    CL  P     ++I++WC +++   E+   Q     LL +   W+ P L+ LP+ Y+++FQ Y ++ C  C   P DP +CLVCG F+C    CC   +   ECV HS  CG GTG+FL+I++SV +IIR  R  LWGSVYLD+ GEED+DLRRGKPL++ +ERY  LE++W +   D   +RWG H N L
Sbjct:  973 VGGPERCHDSWFPGSNLVSNMRHFINYVRVRVPETAPEVKRDSPASTSSDNLGSLQNSGTAQVFSLVAERRKKFQEIINRSSSEANQVVRPKTSSKWSAPGSAPQLTTAILEIKESILSLLIKLHHKLSGKQNSYYPPWLDDIEILIQPEIPKYSHGDGITAVERILLKAASQSRMNKRIIEEICRKVTPPVPPKKVTAAEKKTLDKEERRQKARERQQKLLAEFASRQKSFME-TAMDVDSPENDIPMEITTAEPQVSEAVYDCVICGQSGPSSEDRPTGLVVLLQASSVLGQCRDNVEPKKLPISEEEQIYPWDTCAA--VHDVRLSLLQR----YFKDSSCLLAVSIGWEGGVYVQTCGHTLHIDCHKSYMESLRNDQVLQGFSVDKGEFTCPLCRQFANSVLPCYPGSNVENNPWQRPSNKSIQDLIKEVEEL-----QGRPGAFPSE-----------TNLSKEMESVMKDIKNTTQKKYRDYSKTPGSPDNDFLFMYSVARTNLELELIHRGGNLCSGGASTAGKRSCLNQLFHVLALHMRLYSIDSEYNPWRKL----TQLEEMNP------QLGYEEQQPEVPILYHDVTSLLLIQILMMPQPLRKDHFTCIVKVLFTLLYTQALAALSVKCSEEDRSAWKHAGALKKSTCDAEKSYEVLLSFVISELFKGKLYHEEGTQECAMVNPIA---WSPESMEKCLQDFCLPFLRITSLLQHHLFGEDLPSCQEEEEFSVLASCLGLLPTFYQ-----TEHPFISASCLDWPVPAF-DIITQWCFEIKSFTERHAEQGKA--LLIQESKWKLPHLLQLPENYNTIFQYYHRKTCSVCTKVPKDPAVCLVCGTFVCLKGLCC-KQQSYCECVLHSQNCGAGTGIFLLINASVIIIIRGHRFCLWGSVYLDAHGEEDRDLRRGKPLYICKERYKVLEQQWISHTFDHINKRWGPHYNGL 1888          
The following BLAST results are available for this feature:
BLAST of TCONS_00071022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBR35.671e-16536.39E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens G... [more]
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