TCONS_00070977-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070977-protein
Unique NameTCONS_00070977-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length305

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070977-protein ID=TCONS_00070977-protein|Name=TCONS_00070977-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MADNKKQGKSRKRKTTNEKNTSLQSTLWTYDEKQKFVSALCKGPPYRHEN
GSINWMQLKRFIGTKTLQEVKHFAKTFHAMEHGIAYEEFSTRAAIDVWRQ
LAEKSKGEGDNMADVCIPQALTVAALEPINASPMGEGSSTSATSSSAPSY
RNIYTYLSAITRGAEGPVLNSSESAIVLSMLEDLILTLSKSQTLIQREFL
HSSYPELRSILQTQEGQEANSRNAHFNSINPFGVPFDILDFQLLEQCMEK
GNAAAVDSESAIEKRPASRQSKRKTKANDSDAQKSPVQTRSKRKSSEEKD
TDNGV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044114XLOC_044114Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070977TCONS_00070977Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021281SnAPC_su2-like
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021281Small nuclear RNA activating complex subunit 2-likePFAMPF11035SnAPC_2_likecoord: 13..130
e-value: 1.3E-5
score: 25.5
NoneNo IPR availableGENE3D1.10.10.60coord: 3..82
e-value: 9.4E-7
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableCDDcd00167SANTcoord: 28..77
e-value: 0.00294156
score: 33.703
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 14..76

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070977-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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