TCONS_00070947-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070947-protein
Unique NameTCONS_00070947-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length627

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070947-protein ID=TCONS_00070947-protein|Name=TCONS_00070947-protein|organism=Clytia hemisphaerica|type=polypeptide|length=627bp
MDSKSKVKKKYLDKGLAKLQRAAEADRQDNLTEALSLYVKGTGHLYNSLQ
YDDHTEEEKKSLHANYLEYLRRVEHLEKIIDDEKRRKKEEKRNSKKKKDK
KVFRFQQGGSFEDEKPRPQAPNTAPLARRPLSPPSSSQQTSPTQPNIPQH
SKPVRAVPPTAVASVRPLPPAPPSEEEDFPPFKTATLKRRPPPPVPNTPR
PVITSGSATVGRRPKQPASLNQMKQPLSTSPSLPLMSKQRAQIHREPEIH
SSGTLNRIHNKYNMNDKNGQSSNERKKPFNSLDSDTLLANAQTIIAMATH
EDLKGNYSEALLKYEDAVKLFYYILREYPAIAPASKESIRSHCVLYQDRI
DTLKGMLAHLNPCQRSVSRDTSDIEFDKEYKEVITTEKPNTTLNTVAGHD
QAKELMISTILSPIKFPQAFAVSNGQNPRNILLYGPPGCGKTYLAKALAC
ESKTAAYFYTKASNLVSKYLSNRERLIEVLFEKAREHSPSIIIVDDLEYL
QHKGNESEDSFWKPKQQLAAQITEKSNVPGVYVIGVTNKPWNLDSTFKQS
FDRCVGVTLPDLPSRIKILDSHLKMIQHSLNERQMLQLAHQTDGFSGADI
STLLHDALMLPVYRLQNATHFRMVNFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044098XLOC_044098Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070947TCONS_00070947Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR007330MIT
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..100
NoneNo IPR availableGENE3D1.10.8.60coord: 566..626
e-value: 4.6E-11
score: 42.3
NoneNo IPR availableGENE3D1.20.58.280coord: 281..361
e-value: 4.0E-7
score: 29.6
coord: 1..86
e-value: 7.4E-10
score: 38.3
NoneNo IPR availableGENE3D3.40.50.300coord: 380..565
e-value: 5.5E-31
score: 107.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..233
NoneNo IPR availableCDDcd00009AAAcoord: 426..544
e-value: 2.18018E-17
score: 78.7271
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 427..561
e-value: 9.0E-14
score: 61.8
IPR007330MITSMARTSM00745smartcoord: 284..362
e-value: 0.033
score: 22.9
coord: 8..87
e-value: 0.038
score: 22.2
IPR007330MITPFAMPF04212MITcoord: 288..354
e-value: 1.8E-9
score: 37.4
coord: 12..78
e-value: 7.4E-10
score: 38.7
IPR007330MITSUPERFAMILY116846MIT domaincoord: 283..358
IPR007330MITSUPERFAMILY116846MIT domaincoord: 9..91
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 431..556
e-value: 1.2E-25
score: 90.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 389..618

Blast
[Close]
BLAST of TCONS_00070947-protein vs. Swiss-Prot (Human)
Match: VPS4A (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.463e-69
Identity = 136/356 (38.20%), Postives = 206/356 (57.87%), Query Frame = 0 
Query:  288 LANAQTIIAMATHEDLKGNYSEALLKYEDAVKLFYYILREYPAIAPASKESIRSHCVLYQDRIDTLKGMLAH--------LNPCQRSVSRDTSDIEFDKEYKE--------VITTEKPNTTLNTVAGHDQAKELMISTILSPIKFPQAFAVSNGQNP-RNILLYGPPGCGKTYLAKALACESKTAAYFYTKASNLVSKYLSNRERLIEVLFEKAREHSPSIIIVDDLEYLQHKGNESE-DSFWKPKQQLAAQITE-KSNVPGVYVIGVTNKPWNLDSTFKQSFDRCVGVTLPDLPSRIKILDSHLKMIQHSLNERQMLQLAHQTDGFSGADISTLLHDALMLPVYRLQNATHFRMV 624
            L  A  ++  AT ED   NY EAL  Y+ AV+ F + ++ Y A +  +KESIR+ CV Y DR + LK  L          +   Q       SD E D   K+         +  EKPN   N VAG + AKE +   ++ PIKFP  F  +  + P R ILL+GPPG GK+YLAKA+A E+  + +F   +S+L+SK+L   E+L++ LFE AR+H PSII +D+++ L    NE+E ++  + K +   Q+    +N  G  V+G TN PW LDS  ++ F++ + + LP+  +R ++   HL    H+L +  + +LA +T+G+SGADIS ++ D+LM PV ++Q+ATHF+ V
Sbjct:    6 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIK-YEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKV 358
The following BLAST results are available for this feature:
BLAST of TCONS_00070947-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS4A3.463e-6938.20Vacuolar protein sorting-associated protein 4A OS=... [more]
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