TCONS_00070894-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070894-protein
Unique NameTCONS_00070894-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070894-protein ID=TCONS_00070894-protein|Name=TCONS_00070894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1106bp
MTSYTASCYPIAHQSVLEAILKDDQGNTKEAYCHYISSMLFMLQAMKNDG
WEKKDIQEIRTHDTIKLLKLTDQCLGRIKAFLNFQKDEDKSTSSKEKVTR
QYTTPVPPKSPTSLSPNLTKRTAGRRTSEPPNFHYQQHPNQNNKTLNVNK
TALALINSLPSPPGTRRSSTVNFQHQNQEMYQAFERRKTLSGVKTMKARY
ATTNYNLDLFRKEAEKKALTMAKQKVFQQKWQERQKEIKKEAETRWNLRN
SRSQRDKDYRKRLLEEILTFEETWNVTHQSRDALQQNPSDSSAMIQIVQA
VFKEKNHPLGKVCKGLQYFVYQKVLEILNQQENDGSYLDPVDTLPRPKLP
MMSSIENTGHRDKRYSTSGDAILGIILEDPLFPTQQQGLDQGYNDTKEQS
RNAQLNQSNTSHQSEIGPKSIKSRPEDKVKKPNRGGEGLDQQLNLPNRGQ
SPQESIIYDVKKNGTKDNLIDDVGDVNDVFKSEDGKDLGATTSGLSKTNS
LRKNSDQIDGVDGTTGSLTRINSLRQQYQTVRSTSLEKNYEALEDEMFGS
SDGSQNEESDGEEADDEAEQADVAPFSPIPRTTKPQLPGEISDSETKDDE
TSQDSSSKVVPINTGNLPGTNDTQPSTMDTNLSTNKQITDAQNPSYFSIS
RSRKGLTLQGDHCEETVELQDVDETDCGQHEYDTPYEPSCQSDPESTEPS
CQSTSNYEVPWCSDNISNTEASQRNESGSSVIEIQVIPNTPQGEHGSGTE
DAPLPRHFSGSGEDIDAGAYSDLEEAFEEGPYEGLVTESRIVALTETPEN
ATERVDENPDPECDRNSPPNYYDVNSDSPPPSTNDGVGNTYETLNFNDHE
DEENVYEDLDKLEDDRVDRPAELPSKTLCGNPNEAFPVDTFYLKKLDSII
QEIRFGIDRLHSVLLMVYEELGTPIGKDQAYATLESILFQPLWPWLLQAF
RKLNEHKEEYLTELFRKQHHCTPYDLKVRSKFALCQPETCTQEDPYREAI
EELKKLGNLKCPLDKLECLVRASKSVILCVEEYSKKRGDDKTPLTSGDDL
LGIFSFLIMKTNYPQIVSECHAMEELAYEGYLMGEEGYCLTTLHAAISNL
LIKKDW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044084XLOC_044084Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070894TCONS_00070894Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003123VPS9 domainSMARTSM00167vps9_2coord: 995..1105
e-value: 6.5E-5
score: 22.8
IPR003123VPS9 domainPFAMPF02204VPS9coord: 997..1100
e-value: 4.1E-21
score: 75.1
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 955..1106
score: 24.205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..646
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..766
NoneNo IPR availableSUPERFAMILY109993VPS9 domaincoord: 898..1100

Blast
[Close]
BLAST of TCONS_00070894-protein vs. Swiss-Prot (Human)
Match: VP9D1 (VPS9 domain-containing protein 1 OS=Homo sapiens GN=VPS9D1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 8.171e-37
Identity = 80/217 (36.87%), Postives = 119/217 (54.84%), Query Frame = 0 
Query:  893 LKKLDSIIQEIRFGIDRLHSVLLMVYEELGTPIGKDQAYATLESILFQPLWPWLLQAFRKLNEHKEEYLTELFRKQHHCTPYDLKVRSKFALCQPETCTQED-PYREAIEELKKLGNLKCPLDKLECLVRASKSVILCVEEYSKKRGDDKTP----------LTSGDDLLGIFSFLIMKTNYPQIVSECHAMEELAYEGYLMGEEGYCLTTLHAAIS 1098
            L++L + ++EI   +DRL S+ L+ +E L T   KD+  A +E   F PLWP LL  +R ++  +E  L+       +  P  + + +K     PE       PY  A +EL  L    CP  KLEC+VR  + + +C E+Y      + TP              DDLL I SF+++++  PQ+VSEC A+EE  +EGYL+GEEGYCLT+L +A+S
Sbjct:  405 LQQLKTAVEEIHNAVDRLLSLTLLAFEGLNTAASKDRCLACIEEPFFSPLWPLLLALYRSVHRAREAALSRSMELYRNAPPTAIGIPTKLLPQNPEAKGATGYPYCAAAQELGLLVLESCPQKKLECIVRTLRIICVCAEDYCPT--PEATPQAGPPPIAAAAIGADDLLPILSFVVLRSGLPQLVSECAALEEFIHEGYLIGEEGYCLTSLQSALS 619
The following BLAST results are available for this feature:
BLAST of TCONS_00070894-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VP9D18.171e-3736.87VPS9 domain-containing protein 1 OS=Homo sapiens G... [more]
back to top