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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070873-protein ID=TCONS_00070873-protein|Name=TCONS_00070873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1481bp
MESEFRVKETRKLLEDLKKNFQCTICLELFSQPVSTKCNHIFCQYCLTEM
IGSKKKAKTARCPLCNTNVNKRGTHKNEVMGSLVSSVRELCNAFEDDCQS
AGVDVMPLLSQRDPASQRKFELQRKSSLEKVKMDTQKKISLFDFDLDQSQ
GTSSNTRPSLGQPGKKYSTCTAHNSSSVKNSKQEEQQKEDRRSKINNNKK
KPSKSTKQKSPTKMRKLQSDKTPIKDFEFEKPSSTTKKFSDIQASTSTDD
SNEYIALPNVNKIFIDDDVPPIPQDLGENTLIDESINQEACVSPDKHSSK
SIDKIDSVIPDATNTVNMEELPVIEQFESEPDRVDERLSKVNKNESDKNV
KTGTLKPETSEEKLSEEKLSEVELFRTKSEDILQIQPENIDPEHMDPEHI
GPKIPQKQSPEPELVKQRVKTPFTILTKRNIGNKSENQPAPPAVKTDILH
SDDKHELNNDVEKNQKNNIIEMPDRKEMESINMVSPFKHSKSEIENNEAV
TARTDIKSNEISSPLKVNKSSPSRHLETSPFKSDTECSLSEGSTPTTPSS
ADYAEKVTSMWTKYESPNRDYCLFSNPSFTHQQSPLRARIQQKKLSENFP
FKPKHEKAPVKKPNNELHINKPSALCATKSPVKVIRGKSPQAKEKHENNK
TYQFTDNHPIEQAEDITFNRTEKVSFDLAEEMKVPNVNKGKSQQHTGGSY
SEDCVIPPTPPVKKSKNFKSKDSIIKHNDTTLSTNHTKVTKLPEEINLED
FDDEPMEVFTNEKNLDNERDHEKAKLNTRVGNTKKLKELSQEIKGTIDSA
DVVFDIEACPAKPFRDTERDVIDIGSSIGETDLPTPANKDISRKSNILEE
PIIDQIDIERPCENDTNVTANKKTVYDKTKSSDKDIYIGSSIDVNFDQSQ
PESLHEEENELFGEAHPSPFKNAPNQKMNKQADMFIGSSIGADFDQSGEE
KTKNLFDQYQNDDERFPEPSPPPSPPQPPHMHVDGIPDETLLNQSPPLSQ
PQSSLLKNKPDSPFKKQSSPAKHPSSPEDNFPTSRKSSPLKRHTTPSTDS
SISKNHVKALLNSSKRKRAKRISSSSDSDGEPDNPPSRGEKKKSTLISYT
PPQFPNESESSDDEDDTLPQVPFKKKKLNTATVESVRSSYITPGQRFRED
TTQNTSTNKSILHVSHEEIEDWKTKLRSPIHAPDDDDVTKRPSSPPFAPP
IPVSQSTAIRKEKVTTKAGLPNVSRLSSPLTTYKKLPTPRKQNVSMERSL
EETSPKVESTTKPLKPVIMTTRISRKLLSQCRLISQKFDIVYKNEFDHEV
THLVVNTDENNSLSKSGYTFKYLMALVSGLWIVNYKWLFASFKAQKLVKE
DPYEVKGDPEFLHQLIPNLWRARFHRRNAKPLFHGFRFALLGRFENSPIT
KAQLIALLRQSKSDVIYSPSEMDCSSSQIDTVVITDDVKALTKEERVAMY
NNKPNIFHPDWIVESIINCKVQDRSGHQINV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 178..198 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 147..250 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1177..1258 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 685..721 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 388..553 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 327..369 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 596..668 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 892..1160 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 4..97 |
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 23..65
e-value: 1.2E-8
score: 44.8 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 23..66
score: 12.829 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 22..69
e-value: 1.66024E-11
score: 60.5372 |
| IPR001357 | BRCT domain | GENE3D | 3.40.50.10190 | | coord: 1265..1355
e-value: 1.3E-14
score: 53.6 |
| IPR001357 | BRCT domain | GENE3D | 3.40.50.10190 | | coord: 1371..1479
e-value: 7.8E-7
score: 28.6 |
| IPR001357 | BRCT domain | PROSITE | PS50172 | BRCT | coord: 1294..1355
score: 12.004 |
| IPR001357 | BRCT domain | PROSITE | PS50172 | BRCT | coord: 1378..1479
score: 10.53 |
| IPR001357 | BRCT domain | CDD | cd00027 | BRCT | coord: 1286..1343
e-value: 5.48388E-4
score: 38.8419 |
| IPR001357 | BRCT domain | SUPERFAMILY | 52113 | BRCT domain | coord: 1378..1479 |
| IPR001357 | BRCT domain | SUPERFAMILY | 52113 | BRCT domain | coord: 1272..1359 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 14..97
e-value: 1.6E-16
score: 59.2 |
| IPR027370 | RING-type zinc-finger, LisH dimerisation motif | PFAM | PF13445 | zf-RING_UBOX | coord: 23..63
e-value: 2.4E-8
score: 33.8 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 38..47 |
Blast
The following BLAST results are available for this feature:
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