TCONS_00070858-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070858-protein
Unique NameTCONS_00070858-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070858-protein ID=TCONS_00070858-protein|Name=TCONS_00070858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MVIKTEVILDIKPSSDRRDKQQFSLSNIFDYKMSETQKLIGCCVGIFVCY
FYYGILQEKITRTTYGDEQEKFTYQQTLVWLQCVVNAAFAFLMLKRTSSS
LDNTPALMYIWCSISYMGAMLASNMALRYVNYPTQVLGKSCKPIPVMILG
VLLARKRYPLMKYICVLFIVLGVALFFYKDKKGKSTESTGYGELLLLLSL
TLDGMTGASQDRMRGSYKTQAHAMMYNVNKYSILILGVMVLLTGEIFSFI
AFIGRYPFVLWNMMLFSLTSALGQNFIFSTVASFGPLTCSVVTTTRKFFT
ILFSILFFGNPITSRQSFAVVLVFIGLGLDAKFGKIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044069XLOC_044069Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070858TCONS_00070858Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013657UAA
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013657UAA transporterPFAMPF08449UAAcoord: 40..331
e-value: 8.1E-57
score: 192.6
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 83..182
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 234..329

Blast
[Close]
BLAST of TCONS_00070858-protein vs. Swiss-Prot (Human)
Match: S35B1 (Solute carrier family 35 member B1 OS=Homo sapiens GN=SLC35B1 PE=1 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 3.831e-122
Identity = 185/299 (61.87%), Postives = 237/299 (79.26%), Query Frame = 0 
Query:   42 CCVGIFVCYFYYGILQEKITRTTYGD--EQEKFTYQQTLVWLQCVVNAAFAFLMLKR-TSSSLDNTPALMYIWCSISYMGAMLASNMALRYVNYPTQVLGKSCKPIPVMILGVLLARKRYPLMKYICVLFIVLGVALFFYKDKK--GKSTESTGYGELLLLLSLTLDGMTGASQDRMRGSYKTQAHAMMYNVNKYSILILGVMVLLTGEIFSFIAFIGRYPFVLWNMMLFSLTSALGQNFIFSTVASFGPLTCSVVTTTRKFFTILFSILFFGNPITSRQSFAVVLVFIGLGLDAKFGK 335
            C +G+FVCYFYYGILQEKITR  YG+  +QE FT+  TLV++QCV+NA FA ++++   ++ +D T + +Y  CSISY+GAM++SN AL++VNYPTQVLGKSCKPIPVM+LGV L +K+YPL KY+CVL IV GVALF YK KK  G    + GYGELLLLLSLTLDG+TG SQD MR  Y+T ++ MM N+N +S L+LG+ +L TGE++ F++F  RYP +++N++LF LTSALGQ+FIF TV  FGPLTCS++TTTRKFFTIL S++ F NPI+  Q    VLVF+GLGLDAKFGK
Sbjct:   17 CFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLDAKFGK 315
The following BLAST results are available for this feature:
BLAST of TCONS_00070858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35B13.831e-12261.87Solute carrier family 35 member B1 OS=Homo sapiens... [more]
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