TCONS_00070722-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070722-protein
Unique NameTCONS_00070722-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070722-protein ID=TCONS_00070722-protein|Name=TCONS_00070722-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MDFLFENLFVKEHAEGTRESDIPIEFSFSIRKGDQVIGTCCLQLESFLKN
IEIGENEKNKFFFKPNQPKPNYKILQMTSEKCKDCGEFIPFDKIEEHQNE
VHKDLRPFECKKCGKIFRLLESLTIHQRVHEEKPHKCNECGKSYVHKRTL
QCHIKKVHKGFNKFHCEECSMCYSEKNDLKRHVDAVHKGILHHCCDCGKA
FSRMDYLRRHRQVTHEGTLFNCEVCGKTFPRKDYLERHHMITHEGIKPFK
CKECGKSFTTKEGSIKHLNSVHNITLDENNGLKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043998XLOC_043998Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070722TCONS_00070722Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 135..158
e-value: 0.13
score: 21.3
coord: 192..215
e-value: 0.23
score: 20.6
coord: 249..272
e-value: 0.0045
score: 26.2
coord: 164..187
e-value: 0.053
score: 22.6
coord: 220..243
e-value: 8.8E-4
score: 28.6
coord: 108..130
e-value: 0.005
score: 26.1
coord: 80..102
e-value: 290.0
score: 0.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 137..158
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 166..187
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 222..243
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 110..130
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 194..215
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 251..272
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 135..163
score: 11.843
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 249..272
score: 11.032
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 192..217
score: 11.884
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 220..248
score: 14.524
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 108..135
score: 12.445
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 164..189
score: 10.45
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 106..146
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 200..258
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 133..183
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 192..215
e-value: 0.0094
score: 16.3
coord: 220..243
e-value: 1.8E-5
score: 24.8
coord: 249..272
e-value: 5.8E-4
score: 20.1
coord: 108..130
e-value: 2.6E-4
score: 21.2
NoneNo IPR availableGENE3D3.30.160.60coord: 255..274
e-value: 4.7E-7
score: 29.3
NoneNo IPR availableGENE3D3.30.160.60coord: 202..227
e-value: 4.3E-12
score: 45.5
NoneNo IPR availableGENE3D3.30.160.60coord: 228..242
e-value: 5.7E-7
score: 29.1
NoneNo IPR availableGENE3D2.20.25.10coord: 243..254
e-value: 1.4E-5
score: 24.6
NoneNo IPR availableGENE3D2.20.28.10coord: 117..146
e-value: 1.6E-16
score: 59.8
NoneNo IPR availableGENE3D3.30.160.60coord: 175..201
e-value: 9.7E-9
score: 35.0
coord: 79..116
e-value: 1.6E-8
score: 34.3
coord: 147..174
e-value: 2.6E-10
score: 40.0

Blast
BLAST of TCONS_00070722-protein vs. Swiss-Prot (Human)
Match: ZN565 (Zinc finger protein 565 OS=Homo sapiens GN=ZNF565 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.647e-34
Identity = 75/180 (41.67%), Postives = 107/180 (59.44%), Query Frame = 0
Query:   82 CKDCGE-FIPFDKIEEHQNEVHKDLRPFECKKCGKIFRLLESLTIHQRVHE-EKPHKCNECGKSYVHKRTLQCHIKKVHKGFNKFHCEECSMCYSEKNDLKRHVDAVHKGIL-HHCCDCGKAFSRMDYLRRHRQVTHEGTLFNCEVCGKTFPRKDYLERHHMITHEGIKPFKCKECGKSF 258
            CKDCG+ FI   ++  H+  +H   RP+ECK+CGK FR    LT+HQR+H  EKP++C ECGK ++H   +  H +++H G   + C+EC   + +   L RH   VH G   + C DCGKAFSR  YL +H+++      + C+ CGK F R   L  HH   H   KP++C+ECG +F
Sbjct:  321 CKDCGKAFIRGSQLTVHRR-IHTGARPYECKECGKAFRQHSQLTVHQRIHTGEKPYECKECGKGFIHSSEVTRH-QRIHSGEKPYECKECGKAFRQHAQLTRH-QRVHTGDRPYECKDCGKAFSRSSYLIQHQRIHTGDKPYECKECGKAFIRVSQLT-HHQRIHTCEKPYECRECGMAF 496          

HSP 2 Score: 115.931 bits (289), Expect = 3.362e-29
Identity = 68/191 (35.60%), Postives = 107/191 (56.02%), Query Frame = 0
Query:   82 CKDCGEFIPFDKIEE---HQNEVHKDLRPFECKKCGKIFRLLESLTIHQRVHE-EKPHKCNECGKSYVHKRTLQCHIKKVHKGFNKFHCEECSMCYSEKNDLKRHVDAVHKG-ILHHCCDCGKAFSRMDYLRRHRQVTHEGTLFNCEVCGKTFPRKDYLERHHMITHEGIKPFKCKECGKSFTTKEGSIKH 267
            CKDCG+   F +  E   HQ  +H  ++P+ECK+CGK FR    L +HQR H  EKP+ C +CGK+++    L  H +++H G   + C+EC   + + + L  H   +H G   + C +CGK F     + RH+++      + C+ CGK F +   L RH  + H G +P++CK+CGK+F+     I+H
Sbjct:  265 CKDCGK--AFGRTSELILHQR-LHTGVKPYECKECGKTFRQHSQLILHQRTHTGEKPYVCKDCGKAFIRGSQLTVH-RRIHTGARPYECKECGKAFRQHSQLTVH-QRIHTGEKPYECKECGKGFIHSSEVTRHQRIHSGEKPYECKECGKAFRQHAQLTRHQRV-HTGDRPYECKDCGKAFSRSSYLIQH 449          

HSP 3 Score: 106.686 bits (265), Expect = 5.573e-26
Identity = 69/190 (36.32%), Postives = 99/190 (52.11%), Query Frame = 0
Query:   81 KCKDCGE-FIPFDKIEEHQNEVHKDLRPFECKKCGKIFRLLESLTIHQRVHE-EKPHKCNECGKSYVHKRTLQCHIKKVHKGFNKFHCEECSMCYSEKNDLKRHVDAVHKGILHHCC-DCGKAFSRMDYLRRHRQVTHEGTLFNCEVCGKTFPRKDYLERHHMITHEGIKPFKCKECGKSFTTKEGSIKH 267
            +C +CG+ F     + +HQ  +H   +PF CK+CGK F     L  HQR+H  EKP+ C +CGK++     L  H +++H G   + C+EC   + + + L  H    H G   + C DCGKAF R   L  HR++      + C+ CGK F +   L  H  I H G KP++CKECGK F       +H
Sbjct:  208 ECHECGKAFSRGSHLIQHQK-IHTGEKPFGCKECGKAFSRASHLVQHQRIHTGEKPYDCKDCGKAFGRTSELILH-QRLHTGVKPYECKECGKTFRQHSQLILH-QRTHTGEKPYVCKDCGKAFIRGSQLTVHRRIHTGARPYECKECGKAFRQHSQLTVHQRI-HTGEKPYECKECGKGFIHSSEVTRH 393          

HSP 4 Score: 99.7525 bits (247), Expect = 1.468e-23
Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 0
Query:   81 KCKDCGE-FIPFDKIEEHQNEVHKDLRPFECKKCGKIFRLLESLTIHQRVHE-EKPHKCNECGKSYVHKRTLQCHIKKVHKGFNKFHCEECSMCYSEKNDLKRHVDAVHKGILHHCCDCGKAFSRMDYLRRHRQVTHEGTLFNCEVCGKTFPRKDYLERHHMITHEGIKPFKCKECGKSFTTKEGSIKH 267
            +CK+CG+ FI   ++  HQ  +H   +P+ECK+CGK FR    LT HQRVH  ++P++C +CGK++     L  H +++H G   + C+E                            CGKAF R+  L  H+++      + C  CG  F R   L  H  I H GIKP++C+ECG++F      I+H
Sbjct:  376 ECKECGKGFIHSSEVTRHQR-IHSGEKPYECKECGKAFRQHAQLTRHQRVHTGDRPYECKDCGKAFSRSSYLIQH-QRIHTGDKPYECKE----------------------------CGKAFIRVSQLTHHQRIHTCEKPYECRECGMAFIRSSQLTEHQRI-HPGIKPYECRECGQAFILGSQLIEH 533          
The following BLAST results are available for this feature:
BLAST of TCONS_00070722-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5651.647e-3441.67Zinc finger protein 565 OS=Homo sapiens GN=ZNF565 ... [more]
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