TCONS_00070644-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070644-protein
Unique NameTCONS_00070644-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length491

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070644-protein ID=TCONS_00070644-protein|Name=TCONS_00070644-protein|organism=Clytia hemisphaerica|type=polypeptide|length=491bp
MNNHELKIEKTSILLETTDVSAPIKMTFEIKSGQKVIGNCQVLMENFATT
LELTDVRGNGFLFKPKTKNRRINPPSSRNLSKPLQLINRNSEQQKEAGNL
LLGLIDAVNHNHNQRTFKAPVLNYQNQVSTESIDNFPVIKDSYSIANTVN
KDLNKDDRDNPLHKNDMDIPITDLRFDVVVEKNLTQSSSKSNSKEENLKR
SSECTENAQSVVDENLLKNTTNIPDANKQNSGGMSEPVEILLEVMDNEEI
CTIKNQRKRLKKHQCNDCGLLFYKKSRLESHCNSVHKGLKLFECHECGKS
FSRKDYLKIHQNKHEGNTPHKCKLCENSYLYRNQLIQHVNSAHKGIKSYQ
CEECGKSYYYSNDLKRHHDKIHKGLSPHTCDLCAKSFLRKDHLENHKNAV
HLKIKSHNCEVCGKSYTRREHLNRHQKMHHYFNCNECGKSFARENXHQKI
HHYFNCNECGKSFARENVLAIHLVTHKGRPMTPPPLDGAIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043952XLOC_043952Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070644TCONS_00070644Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 263..286
e-value: 0.92
score: 18.5
coord: 292..314
e-value: 0.0014
score: 27.9
coord: 407..429
e-value: 0.0025
score: 27.1
coord: 378..401
e-value: 0.068
score: 22.3
coord: 454..476
e-value: 0.0077
score: 25.4
coord: 349..372
e-value: 0.014
score: 24.6
coord: 320..343
e-value: 1.6
score: 17.8
coord: 432..451
e-value: 28.0
score: 9.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 351..372
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 294..314
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 456..476
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 380..401
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 265..286
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 263..291
score: 10.887
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 349..377
score: 13.942
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 378..406
score: 11.157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 320..348
score: 9.847
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 454..481
score: 12.799
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 407..429
score: 12.071
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 292..319
score: 14.918
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 261..314
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 431..478
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 405..443
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 300..358
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 358..416
NoneNo IPR availableGENE3D2.20.28.30coord: 417..437
e-value: 2.1E-8
score: 33.9
NoneNo IPR availableGENE3D3.30.160.60coord: 460..480
e-value: 7.5E-6
score: 25.3
NoneNo IPR availableGENE3D2.20.28.10coord: 438..459
e-value: 2.2E-4
score: 20.5
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 431..443
e-value: 0.093
score: 12.6
coord: 453..477
e-value: 0.0016
score: 18.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 349..372
e-value: 0.0011
score: 19.2
coord: 292..314
e-value: 2.8E-6
score: 27.4
coord: 407..429
e-value: 2.5E-4
score: 21.2
NoneNo IPR availableGENE3D3.30.160.60coord: 273..301
e-value: 2.4E-12
score: 46.5
coord: 389..416
e-value: 1.4E-12
score: 47.2
coord: 362..388
e-value: 9.7E-14
score: 51.0
NoneNo IPR availableGENE3D2.10.69.10coord: 330..361
e-value: 8.4E-12
score: 44.6
NoneNo IPR availableGENE3D3.30.160.60coord: 302..329
e-value: 4.5E-14
score: 51.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 181..272
e-value: 0.0028
score: 17.4

Blast
BLAST of TCONS_00070644-protein vs. Swiss-Prot (Human)
Match: ZN510 (Zinc finger protein 510 OS=Homo sapiens GN=ZNF510 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.934e-44
Identity = 94/228 (41.23%), Postives = 131/228 (57.46%), Query Frame = 0
Query:  260 LKKHQCNDCGLLFYKKSRLESHCNSVHKGLKLFECHECGKSFSRKDYLKIHQNKHEGNTPHKCKLCENSYLYRNQLIQHVNSAHKGIKSYQCEECGKSYYYSNDLKRHHDKIHKGLSPHTCDLCAKSFLRKDHLENHKNAVHLKIKSHNCEVCGKSYTRREHLNRHQKMH---HYFNCNECGKSFARENX---HQKIH---HYFNCNECGKSFARENVLAIHLVTHKG 478
            +K ++CN+CG  F +K  L  H    H G K FEC ECGK+FS+K +L  HQ  H    P+KC  C  +++ ++ L  H    H G K Y+C ECGK++   + L+ HH +IH G     C+ C K+F +K +L  H+   H   K++ C  C KS+ R++HL +HQK H     F CNECGK+FAR +    HQ+IH     F CNECGK F R+ +L+ H   H G
Sbjct:  401 MKPYKCNECGKSFCQKGHLIQH-QRTHTGEKPFECSECGKTFSQKSHLSTHQRIHTAEKPYKCNECGKTFVQKSTLRGH-QRIHTGEKPYECSECGKTFVQKSTLRDHH-RIHTGEKSFQCNQCGKTFGQKSNLRIHQR-THTGEKTYQCNECEKSFWRKDHLIQHQKTHTGEKPFKCNECGKTFARTSTLRVHQRIHTGEKPFKCNECGKKFVRKAILSDHQRIHTG 624          

HSP 2 Score: 157.532 bits (397), Expect = 1.413e-41
Identity = 90/227 (39.65%), Postives = 132/227 (58.15%), Query Frame = 0
Query:  261 KKHQCNDCGLLFYKKSRLESHCNSVHKGLKLFECHECGKSFSRKDYLKIHQNKHEGNTPHKCKLCENSYLYRNQLIQHVNSAHKGIKSYQCEECGKSYYYSNDLKRHHDKIHKGLSPHTCDLCAKSFLRKDHLENHKNAVHLKIKSHNCEVCGKSYTRREHLNRHQKMH---HYFNCNECGKSFARE---NXHQKIH---HYFNCNECGKSFARENVLAIHLVTHKG 478
            K  +C++CG  F +KS L +H   +H   K ++C+ECGK+F +K  L+ HQ  H G  P++C  C  +++ ++ L  H +  H G KS+QC +CGK++   ++L R H + H G   + C+ C KSF RKDHL  H+   H   K   C  CGK++ R   L  HQ++H     F CNECGK F R+   + HQ+IH     F CN+CGK+F +++ L IH  TH G
Sbjct:  430 KPFECSECGKTFSQKSHLSTH-QRIHTAEKPYKCNECGKTFVQKSTLRGHQRIHTGEKPYECSECGKTFVQKSTLRDH-HRIHTGEKSFQCNQCGKTFGQKSNL-RIHQRTHTGEKTYQCNECEKSFWRKDHLIQHQ-KTHTGEKPFKCNECGKTFARTSTLRVHQRIHTGEKPFKCNECGKKFVRKAILSDHQRIHTGEKPFQCNKCGKTFGQKSNLRIHQRTHSG 652          

HSP 3 Score: 132.109 bits (331), Expect = 8.119e-33
Identity = 71/182 (39.01%), Postives = 108/182 (59.34%), Query Frame = 0
Query:  261 KKHQCNDCGLLFYKKSRLESHCNSVHKGLKLFECHECGKSFSRKDYLKIHQNKHEGNTPHKCKLCENSYLYRNQLIQHVNSAHKGIKSYQCEECGKSYYYSNDLKRHHDKIHKGLSPHTCDLCAKSFLRKDHLENHKNAVHLKIKSHNCEVCGKSYTRREHLNRHQKMHH---YFNCNECGK 439
            K ++C++CG  F +KS L  H + +H G K F+C++CGK+F +K  L+IHQ  H G   ++C  CE S+  ++ LIQH    H G K ++C ECGK++  ++ L R H +IH G  P  C+ C K F+RK  L +H+  +H   K   C  CGK++ ++ +L  HQ+ H     + CNE GK
Sbjct:  486 KPYECSECGKTFVQKSTLRDH-HRIHTGEKSFQCNQCGKTFGQKSNLRIHQRTHTGEKTYQCNECEKSFWRKDHLIQH-QKTHTGEKPFKCNECGKTFARTSTL-RVHQRIHTGEKPFKCNECGKKFVRKAILSDHQR-IHTGEKPFQCNKCGKTFGQKSNLRIHQRTHSGEKSYECNEYGK 663          

HSP 4 Score: 113.235 bits (282), Expect = 1.373e-26
Identity = 88/289 (30.45%), Postives = 129/289 (44.64%), Query Frame = 0
Query:  266 NDCGLLFYKKSRLESHCNSVHKGLKLFECHECGKSFSRKDYL--------------------------KIHQNK--------------HEGNTPHKCKLCENSYLYRNQLIQHVNSAHKGIKSYQCEECGKSYYYSNDLKRH---------------------------HDKIHKGLSPHTCDLCAKSFLRKDHLENHKNAVHLKIKSHNCEVCGKSYTRREHLNRHQKMH---HYFNCNECGKSFAREN---XHQKIH---HYFNCNECGKSFARENVLAIHLVTHKG 478
            N CG  F +KS +E + N ++ G+K +E +  G +F+RK +L                          + H+NK              H    P+KC  C  S+  +  LIQH    H G K ++C ECGK++   + L  H                           H +IH G  P+ C  C K+F++K  L +H + +H   KS  C  CGK++ ++ +L  HQ+ H     + CNEC KSF R++    HQK H     F CNECGK+FAR + L +H   H G
Sbjct:  312 NQCGKSF-EKSTVEEY-NKLNMGIKHYELNPSGNNFNRKAHLTDPQTAVIEENPLVSNDRTQTWVKSSEYHENKKSYQTSVHRVRRRSHSMMKPYKCNECGKSFCQKGHLIQH-QRTHTGEKPFECSECGKTFSQKSHLSTHQRIHTAEKPYKCNECGKTFVQKSTLRGHQRIHTGEKPYECSECGKTFVQKSTLRDH-HRIHTGEKSFQCNQCGKTFGQKSNLRIHQRTHTGEKTYQCNECEKSFWRKDHLIQHQKTHTGEKPFKCNECGKTFARTSTLRVHQRIHTG 596          
The following BLAST results are available for this feature:
BLAST of TCONS_00070644-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5107.934e-4441.23Zinc finger protein 510 OS=Homo sapiens GN=ZNF510 ... [more]
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