TCONS_00070057-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070057-protein
Unique NameTCONS_00070057-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length809

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070057-protein ID=TCONS_00070057-protein|Name=TCONS_00070057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=809bp
MATEATKILIKPLNGANYATWKVQCRMALIREGLWNIVNETEGVPEQNVD
KYRLRKDRALATIVLSMEPSLLYLLGPDPDDPAEVWKKLSDQFQKKSWAN
KLALRRKLYTLQLKDGQSIQKHIKTITELFDELAIVGDPLDDENKVVHLL
ASLPKSYDMLVTALEANPEVPKIEVVTERLIHEETKQKEGIQQDEKAMSS
RHSNRRGSGKGPQCHFCGKHGHFKRDCYSYKKSLKSDEPKNDDFKPKKKP
IIKQRACPAEEQSDDEEIVGLYVEQTKSEIATDWIIDSGASCHMSYDERL
FNEIKELDEPQEITVGDGFKVKATGVGTLDLYMKLPNGKTNHCRLSDVLY
VPKLSYNLFSVSRTTKRGKRIEFEDSICKVLDKDRKLIAIGMKRGNIYHL
NCVQQSKGTNEAVLCKAEDTKEAVWHRRYGHLGVKNLDRLAKDHLVEGFD
YDVKKEEKFCEPCVSGKQHRTPFPKTGGARAEVLLGEIHSDVCGKIEEKS
LSGAEYFVTFIDDKTRNTWMYTMKHKSETFQKFKEWKAMVEKTTGLKIKR
LRTDNGGEYTSNEFEEYLKAEGIQHKTTIAKTPEQNGVAERMNRTLVETV
RAMLADSKLPKRFWAEALSTAVYLRNRSPTRAVQDMTPYEAWTGAKPNVS
NLRIFGCNAYAHVPKDERAKIDPKTKRCIFLGYGETTKGYRLYDEKKQRV
FFSRDVVFNETEEPNQNKSSPEKEEAATEPAVDINPHNEILDGENDDPRP
RDPPRPRREINPPNRYGDWVVHIAKQDDDPKSIREALSSEEKEKWTVAME
KEFNSLDEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043618XLOC_043618Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070057TCONS_00070057Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025314DUF4219
IPR012337RNaseH-like_dom
IPR025724GAG-pre-integrase_dom
IPR001878Znf_CCHC
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 13..39
e-value: 9.5E-7
score: 28.3
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 487..651
e-value: 3.3E-34
score: 117.7
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 486..655
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 398..468
e-value: 1.3E-12
score: 47.3
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 55..189
e-value: 3.5E-46
score: 156.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..259
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 203..370
e-value: 2.1E-8
score: 33.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 214..227
score: 9.653
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 201..234
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 488..597
e-value: 8.5E-21
score: 74.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 470..646
score: 23.187

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070057-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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