TCONS_00070002-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070002-protein
Unique NameTCONS_00070002-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070002-protein ID=TCONS_00070002-protein|Name=TCONS_00070002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
LGKLSKLDPYIDTNDGLMRVGGRLKRGMLPYATKHQIILPKDHHAVRLLV
RYYHEQNHHVGTEHLISLLRQQYWIIAVRSIVKRVIRSCVKCQKRRPKTG
QVKMAHLPVDRIAVGAPTFFHTGVDFFGPIQVRVLRSKVKRWGCLFTCLV
IRAVLIEVSPSLEADDFINVLDRFINRRGNPEIIRSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043581XLOC_043581Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070002TCONS_00070002Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015416Znf_H2C2_histone_UAS-bd
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015416Zinc finger, H2C2-type, histone UAS bindingPFAMPF09337zf-H2C2coord: 54..93
e-value: 1.5E-7
score: 31.4
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 120..187
e-value: 3.0E-9
score: 36.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070002-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top