TCONS_00069901-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069901-protein
Unique Name	TCONS_00069901-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	485

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069901-protein ID=TCONS_00069901-protein|Name=TCONS_00069901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MDGSEISSDEPKKNGFRYICEPVLFLYSFAYMLQFPTAHQYIYSRFSENI
GFKYSYNNPHAGISRECHHGSMNQTDIHAQQKVQSATAHFQIYYHIMSII
PSTIMNLFYGALSDEVGRRCMMTVVLICSVIESSILLVNIVFKLPLWTIF
IGNACAGFGGGLNGMFMLIIAYTADVTEKMDRSVRIGYIEAALFLGMTIS
NYASGELIHQYGFTIPQVVTVLSHLSAILYVAFVLKKSRDQNKPRNETNK
LLIFWQQPINMWNILVKERANKDLLYLAIFILISGLTFTVSVHSVFTLYL
LNRPFCWLARDVGYIMGTYFLLLSLGTAIGMKILTPTIPEWLLSLLSFMM
SAGSFLYIAFATNKLDLYAAIALRFFGGLPTAIFRGNVSKSVPQNEHGAI
FSVITSIEMLLIMLGIFIFNTSYAHLNDIGHPGWFFLIPAIMLIIPFTLS
VVYWKKTFDLQRKHFYDVTISEEDEEEEKEQLLKE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043531	XLOC_043531	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069901	TCONS_00069901	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 12..252 e-value: 1.4E-17 score: 63.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 264..477 e-value: 1.4E-12 score: 46.8
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 25..415 e-value: 1.1E-23 score: 83.6
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 100..454 e-value: 2.2783E-14 score: 71.9613
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 95..463

Blast

[Close]

BLAST of TCONS_00069901-protein vs. Swiss-Prot (Human)
Match: PCFT (Proton-coupled folate transporter OS=Homo sapiens GN=SLC46A1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.043e-32
Identity = 119/476 (25.00%), Postives = 221/476 (46.43%), Query Frame = 0

Query:    1 MDGSEISSDEPK-KNGFRYIC----EPVLFLYSFAYMLQFPTAHQYIYSRFSENIGFKYSYNNPHAGISRECHHGSMNQTDIHAQQKVQSATAHFQIYYHIMSIIPSTIMNLFYGALSDEVGRRCMMTVVLICSVIESSILLVNIVFKLPLWTIFIGNACAGFGGGLNGMFMLIIAYTADVTEKMDRSVRIGYIEAALFLGMTISNYASGELIHQYGFTIPQVVTVLSHLSAILYVAFVLKKSRDQNKPRNETNKLLIFWQQP--INMWNILVKERANKDL-LY-LAIFILISGLTFTVSVHSVFTLYLLNRPFCWLARDVGYIMGTYFLLLSLGTAIGMKILTPTIPEWLLSL-LSFMMSAGSFLYIAFATNKLDLYAAIALRFFGGLPTAIFRGNVSKSVPQNEHGAIFSVITSIEMLLIMLGIFIFNTSY-AHLNDIGHPGWFFLIPAIMLIIPFTLSVVYWKKTFDLQRKHF 465
            M+GS    ++P+ +     +C    EP++FL +FA +LQ P   QY++ RFS ++G    YN      +R+   G  N++     Q+V++ T+H+ +Y ++   +     +   GA SD VGRR ++ +  +  ++++ + +  +  +L +    +G       G   G+     A  ADV+    R+ R+  +EA++ +   +++   G  +   G+  P  + +   ++  LY AF   ++  + K    + +L  F      + ++     E++ K L LY LAIF++I   T       + TLY L+ P CW ++ +GY      L           +       W+  + L+F +     +  AFAT    ++    L F   + T + R  +SK V + E GA+FS +  +  L ++    IFN+ Y A LN +   G+ FL+ A +L+IP  L  +  K    L+ + F
Sbjct:    1 MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTTQYLWHRFSADLG----YNG-----TRQ-RGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPK----STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVI---TVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILG--MVVFAFATITPLMFTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFM--KGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQF 455

The following BLAST results are available for this feature:

BLAST of TCONS_00069901-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PCFT	1.043e-32	25.00	Proton-coupled folate transporter OS=Homo sapiens ...	[more]

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TCONS_00069901-protein (polypeptide) - C. hemisphaerica